Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3981
Gene Symbol: LIG4
LIG4
0.110 Biomarker disease BEFREE DNA ligase 4 deficiency (LIG4-SCID) causes lymphopenia (T-B-NK<sup>+</sup>) and a radiosensitive SCID (RS-SCID) phenotype. 30061307 2018
Entrez Id: 23495
Gene Symbol: TNFRSF13B
TNFRSF13B
0.110 GeneticVariation disease BEFREE In the pediatric CVID cohort, underweight status was significantly associated with lymphopenia. 29619656 2018
Entrez Id: 4478
Gene Symbol: MSN
MSN
0.110 Biomarker disease BEFREE Mutations in the moesin gene in humans are associated with primary immunodeficiency with profound lymphopenia, and moesin-deficient mice exhibit a similar lymphopenia phenotype. 28978692 2017
Entrez Id: 100
Gene Symbol: ADA
ADA
0.100 GeneticVariation disease BEFREE This observation suggests that heterozygous ADA mutation might be a predisposing factor for lymphopenia in patients receiving corticosteroid therapy. 30327760 2018
Entrez Id: 100
Gene Symbol: ADA
ADA
0.100 GeneticVariation disease BEFREE Genetic deficiency of adenosine deaminase (ADA) can cause profound lymphopenia and result in the clinical presentation of severe combined immune deficiency (SCID). 21725047 2011
Entrez Id: 100
Gene Symbol: ADA
ADA
0.100 GeneticVariation disease BEFREE Hereditary deficiency of adenosine deaminase (ADA) usually causes profound lymphopenia with severe combined immunodeficiency disease. 6134754 1983
Entrez Id: 100
Gene Symbol: ADA
ADA
0.100 Biomarker disease BEFREE The adenosine-deaminase-deficient patients highlight a treatable cause of HIV-negative CD4+ lymphopenia in adults, perhaps accounting for further cases of 'non-HIV AIDS'. 9616253 1998
Entrez Id: 100
Gene Symbol: ADA
ADA
0.100 GeneticVariation disease BEFREE Deficiency in the enzyme adenosine deaminase (ADA) in humans manifests primarily as severe lymphopenia and immunodeficiency, resulting in death by 6 months of age, if untreated. 10833410 2000
Entrez Id: 100
Gene Symbol: ADA
ADA
0.100 AlteredExpression disease BEFREE Decreased lymphocyte adenosine deaminase activity in acute lymphocytic leukemia children and their parents. 1053696 1975
Entrez Id: 100
Gene Symbol: ADA
ADA
0.100 AlteredExpression disease BEFREE Two sisters who noted recurrent, predominantly chest infections in their twenties were found in their thirties to have CD4+ lymphopenia and lymphocyte ADA activity of approximately 5% of the lower limit of normal. 8051429 1994
Entrez Id: 100
Gene Symbol: ADA
ADA
0.100 Biomarker disease BEFREE Adenosine deaminase (ADA) deficiency causes lymphopenia and immunodeficiency due to toxic effects of its substrates. 9758612 1998
Entrez Id: 100
Gene Symbol: ADA
ADA
0.100 Biomarker disease BEFREE Adenosine deaminase (ADA) deficiency in humans leads to a combined immunodeficiency characterized by severe T and B cell lymphopenia. 10720488 2000
Entrez Id: 100
Gene Symbol: ADA
ADA
0.100 Biomarker disease BEFREE Deficiency of ADA caused the most profound lymphopenia; gamma c or Jak3 deficiency resulted in the most B cells and fewest natural killer (NK) cells; NK cells and function were highest in autosomal recessive and unknown types of SCID. 9063412 1997
Entrez Id: 100
Gene Symbol: ADA
ADA
0.100 GeneticVariation disease BEFREE Numerous deleterious mutations occurring in the ADA gene have been found in patients with profound lymphopenia (T<sup>-</sup> B<sup>-</sup> NK<sup>-</sup>), thus underscoring the importance of functional purine metabolism for the development of the immune defense. 28842866 2017
Entrez Id: 100
Gene Symbol: ADA
ADA
0.100 Biomarker disease BEFREE Genetic deficiencies in the purine catabolic enzyme adenosine deaminase (ADA) in humans results primarily in a severe lymphopenia and immunodeficiency that can lead to the death of affected individuals early in life. 15705418 2005
Entrez Id: 112935892
Gene Symbol: LINC02605
LINC02605
0.080 Biomarker disease BEFREE While IL-7 deficiency results in lymphopenia, overexpression of IL-7 can cause neoplasia in experimental models. 30373315 2018
Entrez Id: 112935892
Gene Symbol: LINC02605
LINC02605
0.080 Biomarker disease BEFREE Elevated IL-7 availability does not account for T cell proliferation in moderate lymphopenia. 21239710 2011
Entrez Id: 112935892
Gene Symbol: LINC02605
LINC02605
0.080 Biomarker disease BEFREE IL-7 deficiency has now been found in patients with rheumatoid arthritis, a finding that relates not only to the T-lymphocyte status in this disease but also to the ability of patients with rheumatoid arthritis to recover from therapy-induced lymphopenia. 15642153 2005
Entrez Id: 112935892
Gene Symbol: LINC02605
LINC02605
0.080 Biomarker disease BEFREE Whether IL-7 and IL-15 are insufficient in patients with severe lymphopenia during severe sepsis warrants further investigations. 25692255 2015
Entrez Id: 112935892
Gene Symbol: LINC02605
LINC02605
0.080 Biomarker disease BEFREE Conversely, increased IL-7 and IL-15 can expand memory T cells, including pathogenic tissue-resident memory T cells, as seen in lymphopenia and certain chronic-inflammatory disorders and malignancies. 29664568 2018
Entrez Id: 112935892
Gene Symbol: LINC02605
LINC02605
0.080 Biomarker disease BEFREE Thus, off-target inhibitory effects of IM on IL-7 and STAT5-p explain how T cell lymphopenia occurs in patients treated with IM. 28387753 2017
Entrez Id: 112935892
Gene Symbol: LINC02605
LINC02605
0.080 Biomarker disease BEFREE The aberrant T-cell expansions associated with the pathogenesis of CIN result in increased proliferation/apoptosis and possibly exhaustion of peripheral blood T cells which, in association with the inadequate compensatory thymic export of new TREC expressing T cells partially because of IL-7 deficiency, may contribute to lymphopenia in CIN. 22092365 2012
Entrez Id: 112935892
Gene Symbol: LINC02605
LINC02605
0.080 Biomarker disease BEFREE Although there is increasing interest in the use of IL-7 for the treatment of lymphopenia caused by the HIV type 1, evidence that IL-7 may accelerate HIV replication has raised concerns regarding its use in this setting. 12847229 2003
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.060 Biomarker disease BEFREE All tested patients shared similar immunological features such as a partial TCR/CD3 expression defect, mild alphabeta and gammadelta T lymphocytopenia, poor in vitro proliferative responses to Ags and mitogens at diagnosis, and very low TCR rearrangement excision circles and CD45RA(+) alphabeta T cells. 17277165 2007
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.060 AlteredExpression disease BEFREE The effect of dual TCR expression on LIP was most pronounced in acute lymphopenia, which is driven by recognition of low-affinity self-pMHC ligands. 30168881 2018