Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 100
Gene Symbol: ADA
ADA
0.100 AlteredExpression disease BEFREE Two sisters who noted recurrent, predominantly chest infections in their twenties were found in their thirties to have CD4+ lymphopenia and lymphocyte ADA activity of approximately 5% of the lower limit of normal. 8051429 1994
Entrez Id: 8163
Gene Symbol: CDR3
CDR3
0.010 GeneticVariation disease BEFREE Analysis of the CDR3 region of the rearranged IgH chain genes in patients with severe combined immunodeficiency and severe lymphopenia. 8648110 1996
Entrez Id: 5788
Gene Symbol: PTPRC
PTPRC
0.020 Biomarker disease BEFREE Some SS patients have T lymphocytopenia which mainly affects the CD4+CD45 RA+ subset. 8737717 1996
Entrez Id: 100
Gene Symbol: ADA
ADA
0.100 Biomarker disease BEFREE Deficiency of ADA caused the most profound lymphopenia; gamma c or Jak3 deficiency resulted in the most B cells and fewest natural killer (NK) cells; NK cells and function were highest in autosomal recessive and unknown types of SCID. 9063412 1997
Entrez Id: 3718
Gene Symbol: JAK3
JAK3
0.020 AlteredExpression disease BEFREE Deficiency of ADA caused the most profound lymphopenia; gamma c or Jak3 deficiency resulted in the most B cells and fewest natural killer (NK) cells; NK cells and function were highest in autosomal recessive and unknown types of SCID. 9063412 1997
Entrez Id: 100
Gene Symbol: ADA
ADA
0.100 Biomarker disease BEFREE The adenosine-deaminase-deficient patients highlight a treatable cause of HIV-negative CD4+ lymphopenia in adults, perhaps accounting for further cases of 'non-HIV AIDS'. 9616253 1998
Entrez Id: 940
Gene Symbol: CD28
CD28
0.220 AlteredExpression disease BEFREE We report here an infant with clinical and laboratory features of SCID and selective CD4 lymphopenia and lack of CD28 expression on CD8(+) T cells. 9664084 1998
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.020 Biomarker disease BEFREE Universally binding nucleosomal epitopes are productively recognized by autoreactive T cells by binding to the T-cell receptor-alpha chain; (b) circulating T cells from patients with lupus commonly display a deficiency of the T-cell receptor zeta chain, and upon ligation of their cell-surface antigen receptor overproduce tyrosine phosphorylated proteins; (c) lupus and lupus nephritis are associated with a low-binding FcgammaRIIIA (CD16) polymorphism that crosses ethnic barriers; (d) the pathogenetic role of the cytokine interleukin-10 is expanding, because it is reportedly overproduced not only by cells from lupus patients but also by cells from their healthy relatives, and its overproduction in vitro is correlated with increased apoptotic cell death and with lymphopenia. 9746856 1998
Entrez Id: 2214
Gene Symbol: FCGR3A
FCGR3A
0.020 Biomarker disease BEFREE Universally binding nucleosomal epitopes are productively recognized by autoreactive T cells by binding to the T-cell receptor-alpha chain; (b) circulating T cells from patients with lupus commonly display a deficiency of the T-cell receptor zeta chain, and upon ligation of their cell-surface antigen receptor overproduce tyrosine phosphorylated proteins; (c) lupus and lupus nephritis are associated with a low-binding FcgammaRIIIA (CD16) polymorphism that crosses ethnic barriers; (d) the pathogenetic role of the cytokine interleukin-10 is expanding, because it is reportedly overproduced not only by cells from lupus patients but also by cells from their healthy relatives, and its overproduction in vitro is correlated with increased apoptotic cell death and with lymphopenia. 9746856 1998
Entrez Id: 100
Gene Symbol: ADA
ADA
0.100 Biomarker disease BEFREE Adenosine deaminase (ADA) deficiency causes lymphopenia and immunodeficiency due to toxic effects of its substrates. 9758612 1998
Entrez Id: 3630
Gene Symbol: INS
INS
0.050 GeneticVariation disease BEFREE Several crossing studies using diabetic BB/OK and diabetes-resistant rat strains have clearly shown that the MHC class-II-genes of the RT1u haplotype (Iddm1) and the lymphopenia (Iddm2) are essential but not sufficient for type 1 diabetes development. 9858659 1998
Entrez Id: 3119
Gene Symbol: HLA-DQB1
HLA-DQB1
0.050 GeneticVariation disease BEFREE Several crossing studies using diabetic BB/OK and diabetes-resistant rat strains have clearly shown that the MHC class-II-genes of the RT1u haplotype (Iddm1) and the lymphopenia (Iddm2) are essential but not sufficient for type 1 diabetes development. 9858659 1998
Entrez Id: 3558
Gene Symbol: IL2
IL2
0.040 Biomarker disease BEFREE IL-2 induced an acute lymphopenia of both naive and memory T-helper (TH) lymphocytes. 10197373 1999
Entrez Id: 7409
Gene Symbol: VAV1
VAV1
0.200 Biomarker disease RGD Differential expression of p95vav in primary lymphoid tissue of BB rats congenic for the lymphopenia gene. 10433093 1999
Entrez Id: 27087
Gene Symbol: B3GAT1
B3GAT1
0.010 Biomarker disease BEFREE This profile was particularly evident in cultures from patients with severe CD4+ lymphopenia and paralleled an apparent expansion of the CD8+/CD57+ suppressor cell subset. 10583444 1999
Entrez Id: 100
Gene Symbol: ADA
ADA
0.100 Biomarker disease BEFREE Adenosine deaminase (ADA) deficiency in humans leads to a combined immunodeficiency characterized by severe T and B cell lymphopenia. 10720488 2000
Entrez Id: 355
Gene Symbol: FAS
FAS
0.030 AlteredExpression disease BEFREE Further, plasma levels of soluble CD95 were not altered by decreased lymphocyte activation or by efficient antiretroviral therapy. 10770536 2000
Entrez Id: 100
Gene Symbol: ADA
ADA
0.100 GeneticVariation disease BEFREE Deficiency in the enzyme adenosine deaminase (ADA) in humans manifests primarily as severe lymphopenia and immunodeficiency, resulting in death by 6 months of age, if untreated. 10833410 2000
Entrez Id: 939
Gene Symbol: CD27
CD27
0.010 Biomarker disease BEFREE In patients with active systemic lupus erythematosus (SLE), a marked B lymphocytopenia was identified that affected CD19(+)/CD27(-) naive B cells more than CD19(+)/CD27(+) memory B cells, leading to a relative predominance of CD27-expressing peripheral B cells. 11067960 2000
Entrez Id: 3119
Gene Symbol: HLA-DQB1
HLA-DQB1
0.050 Biomarker disease BEFREE Analysis of cross hybrids of diabetic BB/OK rats and rats of different diabetes-resistant strains has demonstrated that beside the MHC genes, Iddm1 and the lymphopenia, Iddm2, additional non-MHC genes are involved in diabetes development. 11327715 2001
Entrez Id: 3630
Gene Symbol: INS
INS
0.050 Biomarker disease BEFREE Analysis of cross hybrids of diabetic BB/OK rats and rats of different diabetes-resistant strains has demonstrated that beside the MHC genes, Iddm1 and the lymphopenia, Iddm2, additional non-MHC genes are involved in diabetes development. 11327715 2001
Entrez Id: 3932
Gene Symbol: LCK
LCK
0.010 Biomarker disease BEFREE Considering these findings, the aberrant splicing of lck gene is suggested to be correlated, at least with a subset of congenital immunodeficiency plus CD4 lymphopenia. 11351273 2001
Entrez Id: 3981
Gene Symbol: LIG4
LIG4
0.110 CausalMutation disease CLINVAR DNA ligase IV mutations identified in patients exhibiting developmental delay and immunodeficiency. 11779494 2001
Entrez Id: 940
Gene Symbol: CD28
CD28
0.220 Biomarker disease LHGDN Endotoxin-induced lymphopenia was constituted mainly by cells with an immature phenotype (CD45RA(+) CD45RO(-)) that were less likely to undergo apoptosis (CD28(+)), whereas cells with the highest rates of disappearance were characterized by an activated phenotype (CD45RA(-) CD45RO(+)) as well as a phenotype linked to apoptosis (CD95(+) CD28(-)). 11986289 2002
Entrez Id: 355
Gene Symbol: FAS
FAS
0.030 AlteredExpression disease LHGDN Endotoxin-induced lymphopenia was constituted mainly by cells with an immature phenotype (CD45RA(+) CD45RO(-)) that were less likely to undergo apoptosis (CD28(+)), whereas cells with the highest rates of disappearance were characterized by an activated phenotype (CD45RA(-) CD45RO(+)) as well as a phenotype linked to apoptosis (CD95(+) CD28(-)). 11986289 2002