Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3558
Gene Symbol: IL2
IL2
0.040 Biomarker disease BEFREE IL-2 induced an acute lymphopenia of both naive and memory T-helper (TH) lymphocytes. 10197373 1999
Entrez Id: 100
Gene Symbol: ADA
ADA
0.100 Biomarker disease BEFREE Adenosine deaminase (ADA) deficiency in humans leads to a combined immunodeficiency characterized by severe T and B cell lymphopenia. 10720488 2000
Entrez Id: 3574
Gene Symbol: IL7
IL7
0.400 Biomarker disease BEFREE IL-7 deficiency has now been found in patients with rheumatoid arthritis, a finding that relates not only to the T-lymphocyte status in this disease but also to the ability of patients with rheumatoid arthritis to recover from therapy-induced lymphopenia. 15642153 2005
Entrez Id: 112935892
Gene Symbol: LINC02605
LINC02605
0.080 Biomarker disease BEFREE IL-7 deficiency has now been found in patients with rheumatoid arthritis, a finding that relates not only to the T-lymphocyte status in this disease but also to the ability of patients with rheumatoid arthritis to recover from therapy-induced lymphopenia. 15642153 2005
Entrez Id: 51548
Gene Symbol: SIRT6
SIRT6
0.020 Biomarker disease BEFREE SIRT6-deficient mice are small and at 2-3 weeks of age develop abnormalities that include profound lymphopenia, loss of subcutaneous fat, lordokyphosis, and severe metabolic defects, eventually dying at about 4 weeks. 16439206 2006
Entrez Id: 6898
Gene Symbol: TAT
TAT
0.010 Biomarker disease BEFREE TAT-Bcl-x(L) and TAT-BH4 prevented Escherichia coli-induced human lymphocyte apoptosis ex vivo and markedly decreased lymphocyte apoptosis in an in vivo mouse model of sepsis. 16622015 2006
Entrez Id: 3575
Gene Symbol: IL7R
IL7R
0.030 GeneticVariation disease BEFREE Interleukin 7 receptor alpha-chain-mutation severe combined immunodeficiency without lymphopenia: correction with haploidentical T-cell-depleted bone marrow transplantation. 17201233 2006
Entrez Id: 11151
Gene Symbol: CORO1A
CORO1A
0.130 GeneticVariation disease BEFREE Coronin-1A deficiency is a recently recognized autosomal recessive primary immunodeficiency caused by mutations in CORO1A (OMIM 605000) that results in T-cell lymphopenia and is classified as T(-)B(+)NK(+)severe combined immunodeficiency (SCID). 25073507 2014
Entrez Id: 2624
Gene Symbol: GATA2
GATA2
0.140 AlteredExpression disease BEFREE GATA-2 transcription factor deficiency has recently been described in patients with a propensity towards myeloid malignancy associated with other highly variable phenotypic features: chronic leukocytopenias (dendritic cell-, monocyto-, granulocyto-, lymphocytopenia), increased susceptibility to infections, lymphatic vasculature abnormalities, and sensorineural deafness. 25879889 2015
Entrez Id: 55340
Gene Symbol: GIMAP5
GIMAP5
0.260 Biomarker disease BEFREE GIMAP5 has a key role in BB-DR rat and NOD mouse lymphopenia. 25964488 2015
Entrez Id: 7515
Gene Symbol: XRCC1
XRCC1
0.010 GeneticVariation disease BEFREE XRCC1 A1196G was associated with the incidence of lymphopenia (p = 0.024) and diarrhea (p = 0.020). 26033426 2015
Entrez Id: 4363
Gene Symbol: ABCC1
ABCC1
0.010 GeneticVariation disease BEFREE ABCC1 (rs2074087) (P = 0.022, OR = 3.406), IMPDH1 (rs2278294) (P = 0.027, OR = 0.276), and IMPDH2 (rs11706052) (P = 0.034, OR = 3.639) had a significant impact on lymphopenia. 26332308 2015
Entrez Id: 11151
Gene Symbol: CORO1A
CORO1A
0.130 Biomarker disease BEFREE CORO1A deficiency causes T(-)B(+) natural killer-positive severe combined immunodeficiency or T-cell lymphopenia with severe viral infections. 26476480 2016
Entrez Id: 2099
Gene Symbol: ESR1
ESR1
0.020 Biomarker disease BEFREE ESR (P=0.001), CRP (P=0.001), fibrinogen (P=0.009), lymphopenia (P<0.001), neutrophilia (P<0.001), ferritin (P<0.001), leukocytosis (P=0.003), duration of fever before PET/CT (<3 months) were found to be statistically significant for positive contribution of PET/CT results to the diagnosis. 26554525 2018
Entrez Id: 51548
Gene Symbol: SIRT6
SIRT6
0.020 Biomarker disease BEFREE Sirt6-deficient mice displayed dramatic phenotypes including profound lymphopenia, loss of subcutaneous fat, lordokyphosis and low bone marrow density. 28860594 2017
Entrez Id: 57823
Gene Symbol: SLAMF7
SLAMF7
0.010 Biomarker disease BEFREE SLAMF-7 (CD319)-targeted agents (elotuzumab) induce lymphopenia and increase the risk of infection (particularly due to VZV). 29572070 2018
Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
0.120 GeneticVariation disease BEFREE CTLA4 mutations were associated with lymphopenia and decreased T-, B-, and natural killer (NK) cell counts. 29729943 2018
Entrez Id: 9948
Gene Symbol: WDR1
WDR1
0.010 Biomarker disease BEFREE WDR1 deficiency was associated with even more severe abnormalities of the B-cell compartment, including peripheral B-cell lymphopenia, paucity of B-cell progenitors in the bone marrow, lack of switched memory B cells, reduced clonal diversity, abnormal B-cell spreading, and increased apoptosis on B-cell receptor/Toll-like receptor stimulation. 29751004 2018
Entrez Id: 10125
Gene Symbol: RASGRP1
RASGRP1
0.010 Biomarker disease BEFREE RAS guanyl-releasing protein 1 (RASGRP1) deficiency has recently been shown to cause a primary immunodeficiency (PID) characterized by CD4<sup>+</sup> T cell lymphopenia and Epstein-Barr virus (EBV)-associated B cell lymphoma. 30030704 2018
Entrez Id: 3981
Gene Symbol: LIG4
LIG4
0.110 Biomarker disease BEFREE DNA ligase 4 deficiency (LIG4-SCID) causes lymphopenia (T-B-NK<sup>+</sup>) and a radiosensitive SCID (RS-SCID) phenotype. 30061307 2018
Entrez Id: 2252
Gene Symbol: FGF7
FGF7
0.010 Biomarker disease BEFREE Keratinocyte growth factor impairs human thymic recovery from lymphopenia. 31063156 2019
Entrez Id: 3574
Gene Symbol: IL7
IL7
0.400 Biomarker disease BEFREE Interleukin-7 (IL7) plays a nonredundant role in T cell survival and homeostasis, which is illustrated in the severe T cell lymphopenia of IL7-deficient mice, or demonstrated in animals or humans that lack expression of either the IL7Rα or γ <sub>c</sub> chain, the two subunits that constitute the functional IL7 receptor. 31137085 2019
Entrez Id: 3812
Gene Symbol: KIR3DL2
KIR3DL2
0.010 AlteredExpression disease BEFREE KIR3DL2 expression on T cells is highly specific and helps the early diagnosis of SS, especially in those patients with lymphopenia. 31487384 2019
Entrez Id: 100
Gene Symbol: ADA
ADA
0.100 Biomarker disease BEFREE Adenosine deaminase (ADA) deficiency causes lymphopenia and immunodeficiency due to toxic effects of its substrates. 9758612 1998
Entrez Id: 6375
Gene Symbol: XCL1
XCL1
0.010 Biomarker disease LHGDN A lymphotactin-producing monoclonal T-cell lymphoproliferative disorder with extreme lymphocytopenia and progressive leukoencephalopathy. 16923584 2006