Source: ALL
Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 2303
Gene Symbol: FOXC2
FOXC2
0.010 AlteredExpression disease BEFREE FOXC2 drives a tumor-promoting gene expression program in melanoma and is a prognostic indicator of patient response to multiple cancer therapies. 31659103 2020
Entrez Id: 1846
Gene Symbol: DUSP4
DUSP4
0.010 Biomarker disease BEFREE Dual-specificity protein phosphatase DUSP4 regulates response to MEK inhibition in BRAF wild-type melanoma. 31839677 2020
Entrez Id: 58504
Gene Symbol: ARHGAP22
ARHGAP22
0.010 PosttranslationalModification disease BEFREE We identified several methylation changes that can have role during melanoma progression, including hypermethylation of the promoter regions of the ARHGAP22 and NAV2 genes that are commonly altered in locally invasive primary melanomas as well as during metastasis. 31602702 2020
Entrez Id: 9801
Gene Symbol: MRPL19
MRPL19
0.010 AlteredExpression disease BEFREE We recommend using a geometric mean of the expression of CLTA, MRPL19 and ACTB for normalization of gene expression in melanomas and a geometric mean of the expression of CASC3 and RPS2 for normalization of gene expression in melanoma cell lines. 31567589 2020
Entrez Id: 22801
Gene Symbol: ITGA11
ITGA11
0.010 AlteredExpression disease BEFREE In human melanoma, CCN2 expression was associated with a profibrotic ITGA11-expressing subset of cancer-associated fibroblasts that negatively associated with survival. 31610176 2020
Entrez Id: 5420
Gene Symbol: PODXL
PODXL
0.010 AlteredExpression disease BEFREE PODXL and DEL-1 expression in melanoma patients were associated with poor survival and thus can be used as prognostic markers. 31622599 2020
Entrez Id: 406932
Gene Symbol: MIR140
MIR140
0.010 Biomarker disease BEFREE Xenograft models of melanoma were established to verify the role and molecular basis of miR-140-5p. 31385607 2020
Entrez Id: 26263
Gene Symbol: FBXO22
FBXO22
0.010 Biomarker disease BEFREE In conclusion, FBXO22 promoted the migration and invasion of tumor cells and melanoma angiogenesis via HIF-1α upregulation. 30887251 2020
Entrez Id: 55626
Gene Symbol: AMBRA1
AMBRA1
0.010 AlteredExpression disease BEFREE Peritumoral AMBRA1 expression was evaluated in a retrospective discovery cohort of 76 AJCC stage I melanomas. 31056744 2020
Entrez Id: 4176
Gene Symbol: MCM7
MCM7
0.010 Biomarker disease BEFREE MCM7 might mediate the AKT1/mTOR signaling pathway to influence the progress of melanoma. 31535400 2020
Entrez Id: 6187
Gene Symbol: RPS2
RPS2
0.010 AlteredExpression disease BEFREE We recommend using a geometric mean of the expression of CLTA, MRPL19 and ACTB for normalization of gene expression in melanomas and a geometric mean of the expression of CASC3 and RPS2 for normalization of gene expression in melanoma cell lines. 31567589 2020
Entrez Id: 83667
Gene Symbol: SESN2
SESN2
0.010 AlteredExpression disease BEFREE Taken together, our findings illustrated that the upregulation of Sesn2 in response to suspension stress plays a protective role in melanoma against anoikis by detoxifying oxidative stress. 31476315 2020
Entrez Id: 100528016
Gene Symbol: TMX2-CTNND1
TMX2-CTNND1
0.010 PosttranslationalModification disease BEFREE Proteomic analysis reveals a role for RSK in p120-catenin phosphorylation and melanoma cell-cell adhesion. 31678930 2020
Entrez Id: 55553
Gene Symbol: SOX6
SOX6
0.010 Biomarker disease BEFREE We further demonstrate melanoma and PD-inferred gene expression to overlap across tissues (correlation: 0.14, 95% CI 0.06 to 0.22; P = 7.87 × 10<sup>-04</sup>) and highlight seven genes including PIEZO1, TRAPPC2L, and SOX6 as potential mediators of the genetic correlation between melanoma and PD. 31845298 2020
Entrez Id: 22794
Gene Symbol: CASC3
CASC3
0.010 AlteredExpression disease BEFREE We recommend using a geometric mean of the expression of CLTA, MRPL19 and ACTB for normalization of gene expression in melanomas and a geometric mean of the expression of CASC3 and RPS2 for normalization of gene expression in melanoma cell lines. 31567589 2020
Entrez Id: 1211
Gene Symbol: CLTA
CLTA
0.010 AlteredExpression disease BEFREE We recommend using a geometric mean of the expression of CLTA, MRPL19 and ACTB for normalization of gene expression in melanomas and a geometric mean of the expression of CASC3 and RPS2 for normalization of gene expression in melanoma cell lines. 31567589 2020
Entrez Id: 5330
Gene Symbol: PLCB2
PLCB2
0.010 Biomarker disease BEFREE The present study was the first to demonstrate that PLCB2 is a key factor affecting melanoma proliferation and apoptosis. 31746389 2020
Entrez Id: 1629
Gene Symbol: DBT
DBT
0.010 AlteredExpression disease BEFREE Overexpression of DBT kills all four melanoma cell lines tested regardless of the presence of BRAF<sup>V600E</sup> mutation. 31548614 2020
Entrez Id: 10404
Gene Symbol: CPQ
CPQ
0.010 Biomarker disease BEFREE ER-aminopeptidase 1 determines the processing and presentation of an immunotherapy-relevant melanoma epitope. 31729751 2020
Entrez Id: 5580
Gene Symbol: PRKCD
PRKCD
0.010 GeneticVariation disease BEFREE A cohort study of adults with stage IIIC-IV melanoma treated with pembrolizumab or nivolumab during May 1, 2012-February 1, 2018, at Westmead Hospital, Sydney, Australia. 31233857 2020
Entrez Id: 51693
Gene Symbol: TRAPPC2L
TRAPPC2L
0.010 Biomarker disease BEFREE We further demonstrate melanoma and PD-inferred gene expression to overlap across tissues (correlation: 0.14, 95% CI 0.06 to 0.22; P = 7.87 × 10<sup>-04</sup>) and highlight seven genes including PIEZO1, TRAPPC2L, and SOX6 as potential mediators of the genetic correlation between melanoma and PD. 31845298 2020
Entrez Id: 114793
Gene Symbol: FMNL2
FMNL2
0.010 AlteredExpression disease BEFREE FMNL2 expression levels in melanoma tissues were investigated by immunohistochemistry (IHC) assays. 31298385 2019
Entrez Id: 90637
Gene Symbol: ZFAND2A
ZFAND2A
0.010 Biomarker disease BEFREE More importantly, this study unexpectedly revealed that, also in the absence of drugs, AIRAP-silencing hinders melanoma clonogenic potential and spheroid growth, promoting caspase activation and apoptotic cell death, an effect independent of AIRAPL and linked to downregulation of the antiapoptotic protein cIAP2. 31540997 2019
Entrez Id: 51393
Gene Symbol: TRPV2
TRPV2
0.010 AlteredExpression disease BEFREE Moreover, activation of TRPV2 and TRPV4 could lead to the decline of cell viability for melanoma A2058 and A375 cells. 30881453 2019
Entrez Id: 912
Gene Symbol: CD1D
CD1D
0.010 Biomarker disease BEFREE In addition, histologically similar tumors to anaplastic carcinoma like sarcoma and malignant melanoma revealed distinct CD1d staining patterns. 31560833 2019