Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1027
Gene Symbol: CDKN1B
CDKN1B
0.100 Biomarker disease HPO
Entrez Id: 4221
Gene Symbol: MEN1
MEN1
0.100 Biomarker disease HPO
Entrez Id: 1030
Gene Symbol: CDKN2B
CDKN2B
0.100 Biomarker disease HPO
Entrez Id: 1026
Gene Symbol: CDKN1A
CDKN1A
0.100 Biomarker disease HPO
Entrez Id: 1031
Gene Symbol: CDKN2C
CDKN2C
0.100 Biomarker disease HPO
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.170 CausalMutation disease CLINVAR "When a thymic carcinoma ""becomes"" a GIST." 23375402 2013
Entrez Id: 3383
Gene Symbol: ICAM1
ICAM1
0.010 AlteredExpression disease BEFREE Intercellular adhesion molecule-1 was up-regulated in the thymoma TEC to a level similar to normal TEC in response to IFN-gamma. 10886240 2000
Entrez Id: 7293
Gene Symbol: TNFRSF4
TNFRSF4
0.010 Biomarker disease BEFREE OX40, expressed in a fraction of activated CD4+ T cells, may be upregulated in thymic tissues adjacent to GC and thymoma in MG, and OX40 may interact with OX40L in GC to enhance anti-acetylcholine receptor antibody production in MG. 11071109 2000
Entrez Id: 8875
Gene Symbol: VNN2
VNN2
0.010 AlteredExpression disease BEFREE Glycosylphosphatidyl inositol-anchored protein (GPI-80) gene expression is correlated with human thymoma stage. 12967480 2003
Entrez Id: 1326
Gene Symbol: MAP3K8
MAP3K8
0.010 Biomarker disease BEFREE EST status is a potent prognostic factor in thymoma through inactivating estrogens. 16166425 2005
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.100 AlteredExpression disease BEFREE EGFR expression was significantly higher in invasive thymomas (stages III-IV, 15/19 were positive) than in early stage thymomas (stages I-II, 7/33 were positive) (P < 0.0001). 16762968 2006
Entrez Id: 107075310
Gene Symbol: MTCO2P12
MTCO2P12
0.010 AlteredExpression disease BEFREE COX-2 upregulation in thymomas and thymic carcinomas. 16823844 2006
Entrez Id: 4513
Gene Symbol: COX2
COX2
0.010 AlteredExpression disease BEFREE COX-2 upregulation in thymomas and thymic carcinomas. 16823844 2006
Entrez Id: 8456
Gene Symbol: FOXN1
FOXN1
0.040 Biomarker disease LHGDN Foxn1 was diffusely expressed in nuclear staining in all cases of type B thymoma and all but 1 case of type A thymoma, whereas the expression was generally focal in thymic carcinoma (76%). 17592270 2007
Entrez Id: 4065
Gene Symbol: LY75
LY75
0.010 Biomarker disease LHGDN CD205 cytoplasmic expression in the form of coarse granular staining with membranous accentuation was strong and diffuse in all cases of type B thymoma (100%), and a majority of type A thymoma (89%), and focal with variable intensity in thymic carcinoma (59%). 17592270 2007
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.100 GeneticVariation disease LHGDN EGFR protein was expressed in 71% of the thymomas and 53% of the thymic carcinomas. 18448188 2008
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.100 AlteredExpression disease BEFREE EGFR protein was expressed in 71% of the thymomas and 53% of the thymic carcinomas. 18448188 2008
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.170 AlteredExpression disease BEFREE KIT protein was expressed in 88% of the thymic carcinomas and 0% of the thymomas. 18448188 2008
Entrez Id: 4255
Gene Symbol: MGMT
MGMT
0.020 PosttranslationalModification disease BEFREE MGMT methylation was detected in 23% of thymoma and in 83% of thymic carcinoma. 18778870 2009
Entrez Id: 56896
Gene Symbol: DPYSL5
DPYSL5
0.020 Biomarker disease BEFREE Collapsin response mediator protein 5 (CRMP5) antibodies are often associated with thymoma or small cell lung cancer and paraneoplastic syndromes such as limbic encephalitis (LE). 19151024 2009
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.100 Biomarker disease BEFREE Epidermal growth factor receptor (EGFR), a receptor tyrosine kinase that activates multiple signaling pathways, including phosphatidylinositol-3-kinase/v-AKT murine thymoma viral oncogene homolog protein (Akt), has long been a target of novel therapies. 19378324 2009
Entrez Id: 9212
Gene Symbol: AURKB
AURKB
0.010 Biomarker disease BEFREE Serine/threonine protein kinase v-akt murine thymoma viral oncogene homolog (Akt) is one of the survival kinases with multiple biological functions in the brain and throughout the body. 22771711 2012
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.170 Biomarker disease BEFREE KIT is a good molecule marker to differentially diagnose thymic carcinoma from thymoma, while also serving as a predictor of prognosis for TETs. 22938452 2012
Entrez Id: 4255
Gene Symbol: MGMT
MGMT
0.020 PosttranslationalModification disease BEFREE MGMT methylation was significantly more frequent in thymic carcinoma than in thymoma (17/23, 74% versus 13/44, 29%; P<0.001). 24388682 2014
Entrez Id: 4615
Gene Symbol: MYD88
MYD88
0.010 Biomarker disease BEFREE MyD88 was found to be able to interact with p85, a regulatory subunit of phosphoinositide 3-kinase (PI3-K), independent of TLR/IL-1R-mediated response and caused PI3-K/v-akt murine thymoma viral oncogene homolog (Akt) activation, which resulted in subsequent phosphorylation of glycogen synthase kinase-3β and stabilization of Snail, a critical EMT mediator. 24603331 2014