Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 472
Gene Symbol: ATM
ATM
0.010 Biomarker disease BEFREE We have applied spectral karyotyping (SKY) to chemically induced plasmocytomas, mammary gland tumours from transgenic mice overexpressing the c-myc oncogene and thymomas from mice deficient for the ataxia telangiectasia (Atm) gene. 8896561 1996
Entrez Id: 6599
Gene Symbol: SMARCC1
SMARCC1
0.010 AlteredExpression disease BEFREE The expression of anti-sense RNA to SRG3 mRNA in a thymoma cell line, S49.1, reduced the expression level of the SRG3 protein, and decreased the apoptotic cell death induced by glucocorticoids. 9151708 1997
Entrez Id: 54806
Gene Symbol: AHI1
AHI1
0.010 Biomarker disease BEFREE A panel of thymomas induced by intrathymic injection of Mo-MuLV, Abelson murine leukemia virus (A-MuLV), or the bcr-abl/M virus was analyzed for proviral integration near c-myc, N-myc, Pim-1, and Mlvi-1 loci that are frequently occupied by provirus in Mo-MuLV-induced T cell lymphomas, and for integration near Ahi-1 that is often occupied in A-MuLV/M-induced pre-B cell lymphoma. 9204986 1997
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.360 GeneticVariation disease BEFREE Histological and clinical evaluation and also p53 analysis revealed three major tumour groups: non-organotypic thymic carcinomas with frequent p53 alterations (7/9) and occurrence of p53 gene mutations (2/9); malignant thymomas with frequent p53 alterations but without p53 gene mutations (11/18); and benign thymomas with rare p53 alterations and without p53 gene mutations (2/17). 9247629 1997
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.360 GeneticVariation disease BEFREE Our data suggest that, unlike other more common cancers, alteration of the p53 gene may not play a significant role in the tumorigenesis of thymoma. 9398039 1997
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.310 GeneticVariation disease BEFREE A polymorphism in the 3' untranslated region of exon 3 of CDKN2 was detected in 5 cases of thymoma. 9398039 1997
Entrez Id: 595
Gene Symbol: CCND1
CCND1
0.010 Biomarker disease BEFREE To investigate the expression of p16INK4A, RB, p53 and cyclin D1 in thymomas, we first examined 36 thymomas (non-invasive type, 16 cases; invasive type, 20 cases) and 3 thymic carcinomas, using immunohistochemistry. 9398039 1997
Entrez Id: 1017
Gene Symbol: CDK2
CDK2
0.010 GeneticVariation disease BEFREE A polymorphism in the 3' untranslated region of exon 3 of CDKN2 was detected in 5 cases of thymoma. 9398039 1997
Entrez Id: 7273
Gene Symbol: TTN
TTN
0.050 AlteredExpression disease BEFREE Our findings suggest that the initiation of paraneoplastic titin reactivity is correlated with the expression of titin sequences within the thymoma. 9451594 1997
Entrez Id: 8428
Gene Symbol: STK24
STK24
0.010 Biomarker disease BEFREE We purified a protein of 32 kDa from human thymoma HPB-ALL cells that was co-purified with a catalytic fragment of MST (mammalian STE-20-like), a kinase of the STE20 family, which is proteolytically activated by caspase in apoptosis (Lee, K.-K., Murakawa, M., Nishida, E., Tsubuki, S., Kawashima, S., Sakamaki, K., and Yonehara, S. (1998) Oncogene 16, in press). 9668102 1998
Entrez Id: 4294
Gene Symbol: MAP3K10
MAP3K10
0.010 Biomarker disease BEFREE We purified a protein of 32 kDa from human thymoma HPB-ALL cells that was co-purified with a catalytic fragment of MST (mammalian STE-20-like), a kinase of the STE20 family, which is proteolytically activated by caspase in apoptosis (Lee, K.-K., Murakawa, M., Nishida, E., Tsubuki, S., Kawashima, S., Sakamaki, K., and Yonehara, S. (1998) Oncogene 16, in press). 9668102 1998
Entrez Id: 4357
Gene Symbol: MPST
MPST
0.010 Biomarker disease BEFREE We purified a protein of 32 kDa from human thymoma HPB-ALL cells that was co-purified with a catalytic fragment of MST (mammalian STE-20-like), a kinase of the STE20 family, which is proteolytically activated by caspase in apoptosis (Lee, K.-K., Murakawa, M., Nishida, E., Tsubuki, S., Kawashima, S., Sakamaki, K., and Yonehara, S. (1998) Oncogene 16, in press). 9668102 1998
Entrez Id: 55154
Gene Symbol: MSTO1
MSTO1
0.010 Biomarker disease BEFREE We purified a protein of 32 kDa from human thymoma HPB-ALL cells that was co-purified with a catalytic fragment of MST (mammalian STE-20-like), a kinase of the STE20 family, which is proteolytically activated by caspase in apoptosis (Lee, K.-K., Murakawa, M., Nishida, E., Tsubuki, S., Kawashima, S., Sakamaki, K., and Yonehara, S. (1998) Oncogene 16, in press). 9668102 1998
Entrez Id: 8205
Gene Symbol: TAM
TAM
0.010 Biomarker disease BEFREE We purified a protein of 32 kDa from human thymoma HPB-ALL cells that was co-purified with a catalytic fragment of MST (mammalian STE-20-like), a kinase of the STE20 family, which is proteolytically activated by caspase in apoptosis (Lee, K.-K., Murakawa, M., Nishida, E., Tsubuki, S., Kawashima, S., Sakamaki, K., and Yonehara, S. (1998) Oncogene 16, in press). 9668102 1998
Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
0.060 Biomarker disease BEFREE Here we describe an association of Ctla-4 gene to the disease with thymoma and a higher prevalence of CTLA-4 gene polymorphism allele 104 in patients positive for IL-1beta TaqI allele 2, an IL-1beta 'high secretor' phenotype. 9688341 1998
Entrez Id: 6262
Gene Symbol: RYR2
RYR2
0.010 AlteredExpression disease BEFREE Hyperplastic and normal thymuses expressed significant levels of RyR, but RyR gene transcripts was statistically less likely in thymomas than in hyperplastic and normal thymus (P < 0.05). 9736058 1998
Entrez Id: 6261
Gene Symbol: RYR1
RYR1
0.010 AlteredExpression disease BEFREE Hyperplastic and normal thymuses expressed significant levels of RyR, but RyR gene transcripts was statistically less likely in thymomas than in hyperplastic and normal thymus (P < 0.05). 9736058 1998
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.360 Biomarker disease BEFREE The incidence of p53 low and high expressor in thymoma were 19% (5/26) and 8% (2/26), respectively. p53 immunopositivity in thymoma was significantly correlated with PCNA labeling index (LI). p53 expression ratio in invasive thymoma (33%) tended to be higher than that in non-invasive thymoma (18%). p53 expression was detected in one of the thymic carcinoma. 9852302 1998
Entrez Id: 5111
Gene Symbol: PCNA
PCNA
0.010 Biomarker disease BEFREE The incidence of p53 low and high expressor in thymoma were 19% (5/26) and 8% (2/26), respectively. p53 immunopositivity in thymoma was significantly correlated with PCNA labeling index (LI). p53 expression ratio in invasive thymoma (33%) tended to be higher than that in non-invasive thymoma (18%). p53 expression was detected in one of the thymic carcinoma. 9852302 1998
Entrez Id: 4049
Gene Symbol: LTA
LTA
0.020 GeneticVariation disease BEFREE On the other hand, in MG patients with thymoma we found a positive association with the TNFB*2/2 genotype (RR: 5.6; P < 0.01) and a negative association with the TNFB*1 allele (RR: 0.3; P < 0.05) and *1/2 genotype (RR: 0.2; P < 0.01). 9949945 1998
Entrez Id: 7432
Gene Symbol: VIP
VIP
0.010 Biomarker disease BEFREE Functional expression of receptors for calcitonin gene-related peptide, calcitonin, and vasoactive intestinal peptide in the human thymus and thymomas from myasthenia gravis patients. 9973484 1999
Entrez Id: 796
Gene Symbol: CALCA
CALCA
0.010 Biomarker disease BEFREE Functional expression of receptors for calcitonin gene-related peptide, calcitonin, and vasoactive intestinal peptide in the human thymus and thymomas from myasthenia gravis patients. 9973484 1999
Entrez Id: 100124696
Gene Symbol: TEC
TEC
0.010 Biomarker disease BEFREE The molecular and functional expression of serpentine membrane receptors for vasoactive intestinal peptide (VIP), calcitonin gene-related peptide (CGRP), and calcitonin (CT) were characterized in human thymus and thymomas from myasthenia gravis (MG) patients and thymic epithelial cells either in primary culture (PTEC) or transformed by the simian virus 40 large T (SV40LT) oncogene (LT-TEC). 9973484 1999
Entrez Id: 7273
Gene Symbol: TTN
TTN
0.050 Biomarker disease BEFREE Patients without thymoma who had the titin antibody had the same high frequency of TNFA*T1 and TNFB*2 as patients with thymoma, whereas patients without the titin antibody carried the same allele, TNFA*T2 and TNFB*1, regardless of age and thymic disease. 10199335 1999
Entrez Id: 4049
Gene Symbol: LTA
LTA
0.020 Biomarker disease BEFREE Patients without thymoma who had the titin antibody had the same high frequency of TNFA*T1 and TNFB*2 as patients with thymoma, whereas patients without the titin antibody carried the same allele, TNFA*T2 and TNFB*1, regardless of age and thymic disease. 10199335 1999