Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 23583
Gene Symbol: SMUG1
SMUG1
0.030 Biomarker group BEFREE <sup>18</sup>F-FDG PET/CT may help to distinguish hypopharyngeal carcinosarcoma from benign tumors. 29996673 2018
Entrez Id: 79651
Gene Symbol: RHBDF2
RHBDF2
0.010 Biomarker group BEFREE <sup>68</sup>Ga-DOTA-TOC PET/CT resulted in the detection of one focus suspicious for TIO in nine of 15 patients (60%), and a tumour was surgically removed in eight. 29532101 2018
Entrez Id: 6750
Gene Symbol: SST
SST
0.310 AlteredExpression group BEFREE <sup>68</sup>Ga-DOTA-TOC PET/CT is an accurate imaging modality in the detection of TIO; in particular, it is worthwhile after failure of somatostatin receptor SPECT(/CT) or FDG PET/CT. 29532101 2018
Entrez Id: 23583
Gene Symbol: SMUG1
SMUG1
0.030 Biomarker group BEFREE 18F-FDG-PET/CT cannot simply distinguish malignant and benign tumors in retroperitoneal/intra-abdominal cavity; however, the SUVmax of malignant tumors, inflammatory pseudotumor, and PPGL group is higher than the SUVmax of benign tumors, lymph node metastasis, hematoma, and low malignant STS group. 30065620 2018
Entrez Id: 4282
Gene Symbol: MIF
MIF
0.010 AlteredExpression group BEFREE 67 cases of meningiomas, including 57 benign tumors (WHO grade I) and 10 non-benign tumors (WHO grade II and III), were collected, and expression of MIF and MMP9 in tissue microarray was evaluated immunohistochemically. 23372434 2013
Entrez Id: 4318
Gene Symbol: MMP9
MMP9
0.020 AlteredExpression group BEFREE 67 cases of meningiomas, including 57 benign tumors (WHO grade I) and 10 non-benign tumors (WHO grade II and III), were collected, and expression of MIF and MMP9 in tissue microarray was evaluated immunohistochemically. 23372434 2013
Entrez Id: 5580
Gene Symbol: PRKCD
PRKCD
0.010 Biomarker group BEFREE Benign tumors were identified from the population-based Dutch histopathology and cytopathology registry (PALGA).Follow-up was completed on May 1, 2015. 30920605 2019
Entrez Id: 10987
Gene Symbol: COPS5
COPS5
0.020 AlteredExpression group BEFREE Jab1 overexpression was detected in 68.1% (32 of 47) of malignant tumors and 33.3% (11 of 33) of benign tumors. 11751512 2001
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 Biomarker group BEFREE TP53 status was analyzed by yeast functional assay and DNA sequencing in 12 cases of ameloblastoma which were diagnosed histologically and represented the clinical features of a benign tumor. 12269992 2002
Entrez Id: 2192
Gene Symbol: FBLN1
FBLN1
0.010 AlteredExpression group BEFREE Fibulin-1 protein expression was also semiquantitatively assessed by immunoblot analysis in a collection of normal breast tissues (n=18), benign tumours (n=5) and breast carcinomas (n=39). 12644824 2003
Entrez Id: 54474
Gene Symbol: KRT20
KRT20
0.020 AlteredExpression group BEFREE CK-20 expression was observed in the peripheral blood of 19 out of 47 (40.4%) patients with malignant tumors, 2 out of 9 (22.2%) patients with benign tumors and 3 out of 15 (20%) patients with non-tumor diseases. 12894563 2003
Entrez Id: 400566
Gene Symbol: C17orf97
C17orf97
0.010 AlteredExpression group BEFREE CK-20 expression was observed in the peripheral blood of 19 out of 47 (40.4%) patients with malignant tumors, 2 out of 9 (22.2%) patients with benign tumors and 3 out of 15 (20%) patients with non-tumor diseases. 12894563 2003
Entrez Id: 3320
Gene Symbol: HSP90AA1
HSP90AA1
0.020 AlteredExpression group BEFREE HSP90 was increased in malignant PCs, but was also expressed at a lower level in benign tumors. 12970299 2003
Entrez Id: 4193
Gene Symbol: MDM2
MDM2
0.030 Biomarker group BEFREE Mdm2 amplification in benign tumors suggests that it is not sufficient for p53 inactivation in cancer, implying that other defects in the p53 pathway are required for malignancy. 14555661 2003
Entrez Id: 3320
Gene Symbol: HSP90AA1
HSP90AA1
0.020 AlteredExpression group BEFREE HSP90 was increased in malignant PCs but was also expressed at a lower level in benign tumors. 14709792 2003
Entrez Id: 6927
Gene Symbol: HNF1A
HNF1A
0.020 GeneticVariation group BEFREE TCF1: (transcription factor 1) encoding hepatocyte nuclear factor 1alpha (HNF1alpha) is mutated in 50% of liver cell adenomas, a benign tumor closely associated with oral contraceptive use. 15326484 2004
Entrez Id: 6932
Gene Symbol: TCF7
TCF7
0.010 GeneticVariation group BEFREE TCF1: (transcription factor 1) encoding hepatocyte nuclear factor 1alpha (HNF1alpha) is mutated in 50% of liver cell adenomas, a benign tumor closely associated with oral contraceptive use. 15326484 2004
Entrez Id: 1588
Gene Symbol: CYP19A1
CYP19A1
0.020 AlteredExpression group BEFREE Aromatase mRNA levels and enzyme activity are also present in uterine leiomyomata that are estrogen-dependent benign tumors of the myometrium. 16024248 2005
Entrez Id: 5324
Gene Symbol: PLAG1
PLAG1
0.020 Biomarker group BEFREE PSA was detected in 7% of normal breast tissues, in 54.5% of benign tumors and 46.5% of malignant tumors. 16286983 2005
Entrez Id: 29968
Gene Symbol: PSAT1
PSAT1
0.010 Biomarker group BEFREE PSA was detected in 7% of normal breast tissues, in 54.5% of benign tumors and 46.5% of malignant tumors. 16286983 2005
Entrez Id: 5627
Gene Symbol: PROS1
PROS1
0.010 Biomarker group BEFREE PSA was detected in 7% of normal breast tissues, in 54.5% of benign tumors and 46.5% of malignant tumors. 16286983 2005
Entrez Id: 354
Gene Symbol: KLK3
KLK3
0.010 Biomarker group BEFREE PSA was detected in 7% of normal breast tissues, in 54.5% of benign tumors and 46.5% of malignant tumors. 16286983 2005
Entrez Id: 9520
Gene Symbol: NPEPPS
NPEPPS
0.010 Biomarker group BEFREE PSA was detected in 7% of normal breast tissues, in 54.5% of benign tumors and 46.5% of malignant tumors. 16286983 2005
Entrez Id: 1364
Gene Symbol: CLDN4
CLDN4
0.010 Biomarker group BEFREE Claudin 4 was significantly increased in both borderline-type and ovarian adenocarcinomas compared to benign tumours, whereas no changes were found for claudin 1 or 5. 16287068 2006
Entrez Id: 11186
Gene Symbol: RASSF1
RASSF1
0.020 PosttranslationalModification group BEFREE RASSF1A was the most frequently methylated gene in both benign tumors (66%) and EP (56%). 16616114 2006