Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.040 AlteredExpression disease BEFREE On the other hand, simultaneous overexpression of RANKL and TNF in double transgenic mice accelerated disease onset and led to severe arthritis characterized by significantly elevated clinical and histological scores as shown by aggressive pannus formation, extended bone resorption, and massive accumulation of inflammatory cells, mainly of myeloid origin. 30804932 2019
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.040 Biomarker disease BEFREE Furthermore, the migration of cells from the pannus-like tissue was enhanced by IL-1β, while plica cell migration was enhanced by TNF-α. 24223987 2013
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.040 AlteredExpression disease BEFREE MMP-2, MMP-3, MMP-9, IL-1β, and TNF-α mRNA and protein levels measured, respectively, by quantitative real-time PCR and Quantibody human MMP arrays, were highly expressed in extracts of medial plica and pannus-like tissue from stage IV knee joints. 24223987 2013
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.040 Biomarker disease BEFREE The human tumour necrosis factor (TNF) transgenic (hTNFtg) mouse model of RA was used to analyse the time course of pannus attachment to the cartilage and cartilage destruction, respectively, and crossed hTNFtg mice with interleukin (IL)-1(-/-) animals were used to investigate the role of IL-1 on these TNF-induced mechanisms in vivo. 22258493 2012
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.040 Biomarker disease BEFREE The human tumour necrosis factor (TNF) transgenic (hTNFtg) mouse model of RA was used to analyse the time course of pannus attachment to the cartilage and cartilage destruction, respectively, and crossed hTNFtg mice with interleukin (IL)-1(-/-) animals were used to investigate the role of IL-1 on these TNF-induced mechanisms in vivo. 22258493 2012
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.040 AlteredExpression disease BEFREE Pannus-like tissue and the plica express IL-1β and MMP-3. 21371079 2011
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.040 AlteredExpression disease BEFREE Interleukin-1beta, ICAM-1, VCAM-1, and VEGF were increased significantly in pannus compared with the levels in healthy cornea. 19394701 2009
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.040 Biomarker disease BEFREE Invasion of the extracellular matrix (ECM) is accompanied by angiogenesis, in which vascular endothelial growth factor (VEGF) and tissue inhibitors of metalloproteinases (TIMPs), produced by synoviocytes lining the pannus, have a primary role. 17062432 2006
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.040 AlteredExpression disease BEFREE Once expressed, VEGF likely plays a crucial role in the neovascularization of the pannus and the progressive joint destruction associated with the synovial inflammation of RA. 11710707 2001
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.040 Biomarker disease BEFREE Histologic and immunohistochemical analysis of the arthritic joints in GTP-fed mice demonstrated only marginal joint infiltration by IFN-gamma and tumor necrosis factor alpha-producing cells as opposed to massive cellular infiltration and fully developed pannus in arthritic joints of non-GTP-fed mice. 10200295 1999
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.040 Biomarker disease BEFREE Since development of the destructive synovial pannus in rheumatoid arthritis (RA) is associated with changes in vascular permeability (synovial fluid accumulation), synovial cell hyperplasia, and angiogenesis, we examined synovial fluids (SFs) and joint tissue for the expression and local accumulation of VPF/VEGF. 8006592 1994
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.040 AlteredExpression disease BEFREE However, in some microenvironments such as injured tissue or joint spaces, elevated IL-1 levels may contribute to pathologic processes, for example, proliferation and fibrosis of tissue involved in pannus formation as well as degradation of matrix and abnormal tissue architecture. 3497982 1987
Entrez Id: 4318
Gene Symbol: MMP9
MMP9
0.030 AlteredExpression disease BEFREE FPF reduced inflammatory infiltration and pannus formation, articular cartilage destruction and osteoclast infiltration, and the expression of MMP-9 and cathepsin K in the ankle joint. 30906224 2019
Entrez Id: 4318
Gene Symbol: MMP9
MMP9
0.030 AlteredExpression disease BEFREE Locally knocked down SOX5 inhibited MMP-9 expression in the joint tissue and reduced pannus migration and invasion into the cartilage in CIA mice. 29706965 2018
Entrez Id: 4318
Gene Symbol: MMP9
MMP9
0.030 Biomarker disease BEFREE Immunohistochemical staining also demonstrated high expression of MMP-2, MMP-3, and MMP-9 in plica and pannus-like tissue of stage IV OA knees and not in normal cartilage. 24223987 2013
Entrez Id: 8600
Gene Symbol: TNFSF11
TNFSF11
0.020 AlteredExpression disease BEFREE On the other hand, simultaneous overexpression of RANKL and TNF in double transgenic mice accelerated disease onset and led to severe arthritis characterized by significantly elevated clinical and histological scores as shown by aggressive pannus formation, extended bone resorption, and massive accumulation of inflammatory cells, mainly of myeloid origin. 30804932 2019
Entrez Id: 1513
Gene Symbol: CTSK
CTSK
0.020 AlteredExpression disease BEFREE FPF reduced inflammatory infiltration and pannus formation, articular cartilage destruction and osteoclast infiltration, and the expression of MMP-9 and cathepsin K in the ankle joint. 30906224 2019
Entrez Id: 4314
Gene Symbol: MMP3
MMP3
0.020 Biomarker disease BEFREE Proliferation of FLS, induction of pro-nflammatory cytokines and upregulation of metaloprotinase (MMP 3) the key pathologic events for pannus formation are regulated by IL-9 and its recptor. 30114630 2018
Entrez Id: 1009
Gene Symbol: CDH11
CDH11
0.020 Biomarker disease BEFREE A central role for cadherin-11 has also been suggested in the formation of the rheumatoid pannus. 28115292 2017
Entrez Id: 3605
Gene Symbol: IL17A
IL17A
0.020 Biomarker disease BEFREE The expression of all IL-17 cytokines in RA synovium and pannus as well as in the synovium of OA was determined using quantitative RT-PCR (qRT-PCR).IL-17A and IL-17B were immunostained. 24056520 2014
Entrez Id: 3552
Gene Symbol: IL1A
IL1A
0.020 Biomarker disease BEFREE The human tumour necrosis factor (TNF) transgenic (hTNFtg) mouse model of RA was used to analyse the time course of pannus attachment to the cartilage and cartilage destruction, respectively, and crossed hTNFtg mice with interleukin (IL)-1(-/-) animals were used to investigate the role of IL-1 on these TNF-induced mechanisms in vivo. 22258493 2012
Entrez Id: 3605
Gene Symbol: IL17A
IL17A
0.020 Biomarker disease BEFREE Histological analysis showed increased pannus formation associated with cartilage and bone erosion following injection with IL-17. 22825627 2012
Entrez Id: 4314
Gene Symbol: MMP3
MMP3
0.020 AlteredExpression disease BEFREE Pannus-like tissue and the plica express IL-1β and MMP-3. 21371079 2011
Entrez Id: 1009
Gene Symbol: CDH11
CDH11
0.020 AlteredExpression disease BEFREE Immunohistochemical analysis revealed that cadherin 11 is abundantly expressed in cells at the cartilage-pannus junction in rheumatoid synovitis. 19404963 2009
Entrez Id: 5080
Gene Symbol: PAX6
PAX6
0.020 Biomarker disease BEFREE On 3T3 fibroblast feeder layers, Pax6 immunostaining was negative in clones generated from epithelial cells harvested from corneal pannus from SJS or aniridia, but positive in those from the normal limbal epithelium; whereas western blots showed that some epithelial clones expanded from pannus retained Pax6 expression. 18027901 2008