Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 19
Gene Symbol: ABCA1
ABCA1
0.200 Biomarker disease BEFREE Genetic studies have linked age-related macular degeneration (AMD) to genes involved in high-density lipoprotein (HDL) metabolism, including ATP-binding cassette transporter A1 (ABCA1). 28943268 2017
Entrez Id: 19
Gene Symbol: ABCA1
ABCA1
0.200 Biomarker disease BEFREE Here, we demonstrate that targeted deletion of macrophage cholesterol ABC transporters A1 (ABCA1) and -G1 (ABCG1) leads to age-associated extracellular cholesterol-rich deposits underneath the neurosensory retina similar to SDD seen in early human AMD. 30185655 2018
Entrez Id: 19
Gene Symbol: ABCA1
ABCA1
0.200 GeneticVariation disease BEFREE Significant associations were found between AMD and variants in ABCA1 and FADS1-3, and a nearly significant association in TIMP3. 21613373 2011
Entrez Id: 19
Gene Symbol: ABCA1
ABCA1
0.200 GeneticVariation disease BEFREE The ABCA1 rs1883025 variant showed significant association with the lower risk of overall AMD under the allelic model (OR= 0.81, 95   %   CI=0.74-0.89). 26608582 2016
Entrez Id: 19
Gene Symbol: ABCA1
ABCA1
0.200 GeneticVariation disease BEFREE After multivariate adjustment for age, sex, educational level, smoking, BMI, lipid-lowering medication use, cardiovascular disease and diabetes, and for all relevant genetic polymorphisms (ApoE2, ApoE4, CFH Y402H, ARMS2 A69S, LIPC rs10468017, LIPC rs493258, LPL rs12678919, ABCA1 rs1883025 and CETP rs3764261), higher HDL was significantly associated with an increased risk of early (OR = 2.45, 95%CI: 1.54-3.90; P = 0.0002) and any AMD (OR = 2.29, 95%CI: 1.46-3.59; P = 0.0003). 24608419 2014
Entrez Id: 19
Gene Symbol: ABCA1
ABCA1
0.200 GeneticVariation disease BEFREE Associations of LIPC rs10468017, CETP and ABCA1 polymorphisms with AMD did not reach statistical significance. 24223199 2013
Entrez Id: 19
Gene Symbol: ABCA1
ABCA1
0.200 GeneticVariation disease BEFREE Interestingly, the effect of TLR4, APOE and ABCA1 variants on AMD susceptibility was opposite to that of association with atherosclerosis risk. 15829498 2005
Entrez Id: 19
Gene Symbol: ABCA1
ABCA1
0.200 GeneticVariation disease BEFREE Consistent with the hypothesis that HDL metabolism is associated with AMD pathogenesis, we also observed association with AMD of HDL-c-associated alleles near LPL (P = 3.0 x 10(-3)) and ABCA1 (P = 5.6 x 10(-4)). 20385819 2010
Entrez Id: 19
Gene Symbol: ABCA1
ABCA1
0.200 Biomarker disease BEFREE Our results highlight the essential homeostatic role for lipid efflux in the RPE and suggest a pathogenic contribution of reduced ABCA1 function to AMD. 30864945 2019
Entrez Id: 19
Gene Symbol: ABCA1
ABCA1
0.200 Biomarker disease BEFREE After further adjustment for known genetic factors, the protective effect of the TT genotype was significant for intermediate drusen (LIPC [odds ratio (OR), 0.56; 95% confidence interval (CI), 0.33-0.94], ABCA1 [OR, 0.48; 95% CI, 0.27-0.85]), large drusen (LIPC [OR, 0.58; 95% CI, 0.34-0.98)], ABCA1 [OR, 0.41; 95% CI, 0.23-0.74)]), and advanced AMD (LIPC [OR, 0.39; 95% CI, 0.21-0.74)], ABCA1 [OR, 0.35; 95% CI, 0.17-0.71)]). 21447678 2011
Entrez Id: 19
Gene Symbol: ABCA1
ABCA1
0.200 GeneticVariation disease GWASCAT A large genome-wide association study of age-related macular degeneration highlights contributions of rare and common variants. 26691988 2016
Entrez Id: 19
Gene Symbol: ABCA1
ABCA1
0.200 Biomarker disease BEFREE CFH and, inversely, ABCA1 seem to be involved in early drusen development, while the role of ARMS2 is more pronounced in advanced stages of early AMD. 24970616 2014
Entrez Id: 19
Gene Symbol: ABCA1
ABCA1
0.200 GeneticVariation disease BEFREE Cholesterol efflux genes (APOE and ABCA1) were identified as risk factors for AMD, although how cholesterol efflux influences accumulation of this lipid in sub-RPE deposits remains elusive. 28973423 2017
Entrez Id: 19
Gene Symbol: ABCA1
ABCA1
0.200 GeneticVariation disease BEFREE Loci in the recently reported genes ABCA1 and COL8A1 were also detected with suggestive evidence of association with advanced AMD. 21665990 2011
Entrez Id: 19
Gene Symbol: ABCA1
ABCA1
0.200 GeneticVariation disease GWASDB Common variants near FRK/COL10A1 and VEGFA are associated with advanced age-related macular degeneration. 21665990 2011
Entrez Id: 19
Gene Symbol: ABCA1
ABCA1
0.200 AlteredExpression disease BEFREE Cholesterol transporters such as CD36, SR-B1 and ABCA1 gene expressions were also found to be higher (1.5, 1.9 and 2.4-fold respectively) in AMD, though not statistically significant. 27693409 2016
Entrez Id: 19
Gene Symbol: ABCA1
ABCA1
0.200 GeneticVariation disease BEFREE Rs10468017 in LIPC, rs12678919 near LPL and rs1883025 in ABCA1 were not found to be associated with advanced AMD (all p > 0.05). 24498989 2015
Entrez Id: 24
Gene Symbol: ABCA4
ABCA4
0.700 GeneticVariation disease BEFREE In contrast, hRPE cells of the AMD-protective CFH haplotype (YY402/II62) showed no complement activation following exposure to either Abca4(-/-) or wild-type OS. 24550392 2014
Entrez Id: 24
Gene Symbol: ABCA4
ABCA4
0.700 GeneticVariation disease BEFREE Mutations in the ABCA4 gene are responsible for a number of related retinal degenerative diseases, including Stargardt macular degeneration, cone-rod dystrophy, retinitis pigmentosa, and age-related macular degeneration. 19056738 2009
Entrez Id: 24
Gene Symbol: ABCA4
ABCA4
0.700 GeneticVariation disease BEFREE A comprehensive survey of sequence variation in the ABCA4 (ABCR) gene in Stargardt disease and age-related macular degeneration. 10958763 2000
Entrez Id: 24
Gene Symbol: ABCA4
ABCA4
0.700 Biomarker disease HPO
Entrez Id: 24
Gene Symbol: ABCA4
ABCA4
0.700 GeneticVariation disease BEFREE Stargardt disease (STGD, also known as fundus flavimaculatus; FFM) is an autosomal recessive retinal disorder characterized by a juvenile-onset macular dystrophy, alterations of the peripheral retina, and subretinal deposition of lipofuscin-like material. 9054934 1997
Entrez Id: 24
Gene Symbol: ABCA4
ABCA4
0.700 GeneticVariation disease BEFREE Mutations in the ABCA4 gene contribute to age-related macular degeneration. 12437993 2003
Entrez Id: 24
Gene Symbol: ABCA4
ABCA4
0.700 GeneticVariation disease LHGDN Null ABCA4 gene mutations found in Japanese patients with panretinal degeneration. 16604398 2006
Entrez Id: 24
Gene Symbol: ABCA4
ABCA4
0.700 GeneticVariation disease BEFREE Because A2E accumulation in the RPE is associated with pathogenesis of both Stargardt disease and age-related macular degeneration (AMD) in humans, deletion of Abca4 was introduced into Atg7(flox/flox);VMD2-rtTA-cre+ mice to investigate the role of autophagy during A2E accumulation. 26468292 2015