Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.060 Biomarker disease BEFREE This included a germ cell tumor in 12 (30%) patients by the finding of i(12p), increased 12p copy number, or a deletion of the long arm of chromosome 12. 7799031 1995
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.060 Biomarker disease BEFREE The metastatic yolk sac tumor had a hypertriploid karyotype and a DI of 1.78 and lacked the germ cell tumor marker i(12p). 2297683 1990
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.060 Biomarker disease BEFREE Clonal relationship between the teratoma and rhabdomyosarcoma of the germ cell tumor was established by the presence in both of i(12p), the characteristic marker of germ cell tumors. 1676906 1991
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.060 GeneticVariation disease BEFREE One or more copies of i(12p), excess 12p copy number, or a deletion on the long arm of chromosome 12 was found in seven of 28 (25%) midline tumors of uncertain histogenesis, thus establishing a diagnosis of a germ cell tumor in these patients. 8308927 1994
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.060 Biomarker disease BEFREE In one case, two copies of the germ cell tumor marker i(12p) were found. 2331686 1990
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.060 Biomarker disease BEFREE The most significant cytogenetic finding was the presence of the metacentric germ cell tumor marker i(12p) in an inguinal metastasis. 2766245 1989
Entrez Id: 174
Gene Symbol: AFP
AFP
0.050 AlteredExpression disease BEFREE Preoperative serum alpha-fetoprotein (AFP) levels were reviewed in germ cell tumor (GCT) cases and analyzed to predict malignancy in various age groups. 28967388 2017
Entrez Id: 174
Gene Symbol: AFP
AFP
0.050 Biomarker disease BEFREE By establishing sensitive nested reverse transcription-PCRs for the detection of mRNA of alpha-fetoprotein (AFP) and beta human chorionic gonadotropin (betahCG), we investigated the presence of circulating tumor cells in the peripheral blood of 119 patients with germ-cell tumor. 10866307 2000
Entrez Id: 174
Gene Symbol: AFP
AFP
0.050 Biomarker disease BEFREE We recommend that all males with KS and early sexual development or with "normal" testicular growth be screened with measurement of germ cell tumor markers including beta-subunit of human chorionic gonadotropin and alpha-fetoprotein. 7535510 1995
Entrez Id: 174
Gene Symbol: AFP
AFP
0.050 Biomarker disease BEFREE Hereditary persistence of alpha-fetoprotein (HPAFP) should be considered in both children and adults with unexplained and persistent elevation of AFP e.g., those screened for hepatocellular carcinoma or diagnosed for germ cell tumor. 9681083 1998
Entrez Id: 174
Gene Symbol: AFP
AFP
0.050 Biomarker disease BEFREE The prognostic information provided by alpha-fetoprotein and human chorionic gonadotrophin in the management of germ cell tumor (GCT) patients is a biochemical reflection of tumor differentiation. 12860944 2003
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.030 AlteredExpression disease BEFREE Cluster analysis of p53 and Ki67 expression, apoptosis, alpha-fetoprotein, and human chorionic gonadotrophin indicates a favorable prognostic subgroup within the embryonal carcinoma germ cell tumor. 12860944 2003
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.030 GeneticVariation disease BEFREE By comparing candidate driving genes between AYA cancers and those from all age groups for the same type of cancer, we identified different driving genes in prostate cancer and a germ cell tumor in AYAs compared with all age groups, whereas three common alterations (TP53, FAT1, and NOTCH1) in head and neck cancer were identified in both groups. 26925973 2016
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.030 Biomarker disease BEFREE None of the remaining eight cases with frequent positive cells, the nine cases with occasionally positive p53 staining, or the two cases with no staining recurred or demonstrated other germ cell tumor elements. 12202994 2003
Entrez Id: 1440
Gene Symbol: CSF3
CSF3
0.020 Biomarker disease BEFREE Successful hematopoietic stem cell mobilization with vinorelbine and filgrastim in germ cell tumor. 27165295 2017
Entrez Id: 1440
Gene Symbol: CSF3
CSF3
0.020 Biomarker disease BEFREE To examine the impact of granulocyte-colony stimulating factor (G-CSF) use on the incidence and severity of bleomycin-induced pneumonitis (BIP) in patients with germ cell tumor (GCT) receiving first-line chemotherapy. 28943331 2017
Entrez Id: 1442
Gene Symbol: CSH1
CSH1
0.010 Biomarker disease BEFREE From 1987 to 2001, DMC for CS I seminomatous germ cell tumor (SGCT) patients were EUR 13.790 ± 4.700. 29514158 2018
Entrez Id: 1676
Gene Symbol: DFFA
DFFA
0.010 Biomarker disease BEFREE Mutations in the N-terminal domain of DFF45 in a primary germ cell tumor and in neuroblastoma tumors. 15492818 2004
Entrez Id: 22883
Gene Symbol: CLSTN1
CLSTN1
0.010 Biomarker disease BEFREE From 1987 to 2001, DMC for CS I seminomatous germ cell tumor (SGCT) patients were EUR 13.790 ± 4.700. 29514158 2018
Entrez Id: 9573
Gene Symbol: GDF3
GDF3
0.010 GeneticVariation disease BEFREE Notably, human STELLAR is located distal to a previously uncharacterized homeobox gene, which is the human homolog of the recently identified murine gene, Nanog, and proximal to the GDF3 locus, whose transcription is restricted to germ cell tumor cells. 14990856 2004
Entrez Id: 642559
Gene Symbol: POU5F1P3
POU5F1P3
0.010 GeneticVariation disease BEFREE Recently, major progress has been made in identifying gene-products related to germ cell tumor development (testis-specific protein-Y encoded and octamer binding transcription factor 3/4) and in recognizing early changes of germ cells (maturation delay, preneoplastic lesions, and in situ neoplasia). 16735607 2006
Entrez Id: 10942
Gene Symbol: PRSS21
PRSS21
0.010 Biomarker disease BEFREE Bisulfite sequencing and subsequent real-time RT-PCR were carried out in germ cell tumor cell lines and a cervical carcinoma cell line to reveal CpG sites implicated in testisin gene silencing. 16810501 2006
Entrez Id: 728137
Gene Symbol: TSPY3
TSPY3
0.010 Biomarker disease BEFREE TSPY protein localized with established germ cell tumor markers, such as the placental alkaline phosphatase, c-KIT, and OCT3/4, in the same tumor cells of both gonadoblastoma and adjacent carcinoma in situ, the precursor for germ cell tumors. 17349529 2007
Entrez Id: 3728
Gene Symbol: JUP
JUP
0.010 Biomarker disease BEFREE The most highly conserved gene set in this cross-species analysis included potential driver genes such as JUP, which we show to be essential for germ cell tumor cell growth. 31087453 2019
Entrez Id: 333929
Gene Symbol: SNAI3
SNAI3
0.010 AlteredExpression disease BEFREE Human SNAI3 mRNA was expressed in skin melanotic melanoma, lung epidermoid carcinoma, and germ cell tumor. 12579345 2003