Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 2532
Gene Symbol: ACKR1
ACKR1
0.010 Biomarker disease BEFREE Interaction of Herpes Simplex Virus (HSV) glycoprotein D (gD) with the host cell surface during Chlamydia trachomatis/HSV co-infection stimulates chlamydiae to become persistent. 25414835 2014
Entrez Id: 11332
Gene Symbol: ACOT7
ACOT7
0.020 Biomarker disease BEFREE For approach 2, specimens initially positive by SDA and the Hybrid Capture 2 CT-ID DNA Test (HC2; Digene Corp.) were retested by different NAATs (SDA, PCR, AC2, and the APTIMA assay for C. trachomatis [ACT]). 16825373 2006
Entrez Id: 11332
Gene Symbol: ACOT7
ACOT7
0.020 Biomarker disease BEFREE Aliquots of the urine samples were sent to Aarhus, Denmark, and further examined with the Roche COBAS Amplicor CT (RCA) PCR, the Gen-Probe Aptima Combo 2 assay (AC2) targeting the C. trachomatis 23S rRNA, and the Aptima C. trachomatis assay (ACT) targeting the 16S rRNA molecule. 18842934 2008
Entrez Id: 60
Gene Symbol: ACTB
ACTB
0.040 Biomarker disease BEFREE Members of the conserved TarP protein family comprise such effector proteins that polymerize actin, and in the case of the C. trachomatis TarP protein, has been shown to play a critical role in pathogenesis. 30629647 2019
Entrez Id: 60
Gene Symbol: ACTB
ACTB
0.040 GeneticVariation disease BEFREE We examined the effects of domain specific Tarp mutations on chlamydial invasion and growth and demonstrate that C. trachomatis clones harboring engineered Tarp mutants lacking either the actin binding domain or the phosphorylation domain had reduced levels of invasion into host cells. 27602332 2016
Entrez Id: 60
Gene Symbol: ACTB
ACTB
0.040 Biomarker disease BEFREE Biophysical characterization of actin bundles generated by the Chlamydia trachomatis Tarp effector. 29660331 2018
Entrez Id: 60
Gene Symbol: ACTB
ACTB
0.040 Biomarker disease BEFREE Actin and intermediate filaments stabilize the Chlamydia trachomatis vacuole by forming dynamic structural scaffolds. 18692775 2008
Entrez Id: 345651
Gene Symbol: ACTBL2
ACTBL2
0.020 Biomarker disease BEFREE Aliquots of the urine samples were sent to Aarhus, Denmark, and further examined with the Roche COBAS Amplicor CT (RCA) PCR, the Gen-Probe Aptima Combo 2 assay (AC2) targeting the C. trachomatis 23S rRNA, and the Aptima C. trachomatis assay (ACT) targeting the 16S rRNA molecule. 18842934 2008
Entrez Id: 345651
Gene Symbol: ACTBL2
ACTBL2
0.020 Biomarker disease BEFREE For approach 2, specimens initially positive by SDA and the Hybrid Capture 2 CT-ID DNA Test (HC2; Digene Corp.) were retested by different NAATs (SDA, PCR, AC2, and the APTIMA assay for C. trachomatis [ACT]). 16825373 2006
Entrez Id: 71
Gene Symbol: ACTG1
ACTG1
0.020 Biomarker disease BEFREE For approach 2, specimens initially positive by SDA and the Hybrid Capture 2 CT-ID DNA Test (HC2; Digene Corp.) were retested by different NAATs (SDA, PCR, AC2, and the APTIMA assay for C. trachomatis [ACT]). 16825373 2006
Entrez Id: 71
Gene Symbol: ACTG1
ACTG1
0.020 Biomarker disease BEFREE Aliquots of the urine samples were sent to Aarhus, Denmark, and further examined with the Roche COBAS Amplicor CT (RCA) PCR, the Gen-Probe Aptima Combo 2 assay (AC2) targeting the C. trachomatis 23S rRNA, and the Aptima C. trachomatis assay (ACT) targeting the 16S rRNA molecule. 18842934 2008
Entrez Id: 72
Gene Symbol: ACTG2
ACTG2
0.020 Biomarker disease BEFREE For approach 2, specimens initially positive by SDA and the Hybrid Capture 2 CT-ID DNA Test (HC2; Digene Corp.) were retested by different NAATs (SDA, PCR, AC2, and the APTIMA assay for C. trachomatis [ACT]). 16825373 2006
Entrez Id: 72
Gene Symbol: ACTG2
ACTG2
0.020 Biomarker disease BEFREE Aliquots of the urine samples were sent to Aarhus, Denmark, and further examined with the Roche COBAS Amplicor CT (RCA) PCR, the Gen-Probe Aptima Combo 2 assay (AC2) targeting the C. trachomatis 23S rRNA, and the Aptima C. trachomatis assay (ACT) targeting the 16S rRNA molecule. 18842934 2008
Entrez Id: 108
Gene Symbol: ADCY2
ADCY2
0.020 Biomarker disease BEFREE Aliquots of the urine samples were sent to Aarhus, Denmark, and further examined with the Roche COBAS Amplicor CT (RCA) PCR, the Gen-Probe Aptima Combo 2 assay (AC2) targeting the C. trachomatis 23S rRNA, and the Aptima C. trachomatis assay (ACT) targeting the 16S rRNA molecule. 18842934 2008
Entrez Id: 108
Gene Symbol: ADCY2
ADCY2
0.020 Biomarker disease BEFREE In an analytical-method comparison study of clinical samples, the Abbott RealTime CT new formulation assay (m2000 real-time PCR), consisting of a duplex PCR targeting different parts of the cryptic plasmid in Chlamydia trachomatis, was compared both with version 2 of the Roche Cobas TaqMan CT assay, comprising a duplex PCR for a target in the cryptic plasmid and the omp1 gene, and with the Gen-Probe Aptima Combo 2 assay (AC2) targeting the C. trachomatis 23S rRNA molecule. 20007394 2010
Entrez Id: 79026
Gene Symbol: AHNAK
AHNAK
0.010 Biomarker disease BEFREE These data indicate that CT694 is a novel T3S-dependent substrate unique to C. trachomatis, and that its interaction with host proteins such as AHNAK may be important for aspects of invasion or development particular to this species. 19460098 2009
Entrez Id: 10598
Gene Symbol: AHSA1
AHSA1
0.010 Biomarker disease BEFREE IL-8 induced by infection with C. trachomatis L2 was shown to be dependent on ERK and independent of p38 and Jun N-terminal MAPK by use of chemical inhibitors of the signaling pathways. 17893134 2007
Entrez Id: 7965
Gene Symbol: AIMP2
AIMP2
0.010 Biomarker disease BEFREE IL-8 induced by infection with C. trachomatis L2 was shown to be dependent on ERK and independent of p38 and Jun N-terminal MAPK by use of chemical inhibitors of the signaling pathways. 17893134 2007
Entrez Id: 11214
Gene Symbol: AKAP13
AKAP13
0.010 GeneticVariation disease BEFREE The p47 GTPases Igtp and Irgb10 map to the Chlamydia trachomatis susceptibility locus Ctrq-3 and mediate cellular resistance in mice. 16959883 2006
Entrez Id: 312
Gene Symbol: ANXA13
ANXA13
0.010 Biomarker disease BEFREE To determine the ability of polymorphic membrane proteins (Pmps) to induce cross-species protective immune responses, recombinant fragments from all nine C. trachomatis serovar E Pmps were used to vaccinate BALB/c mice utilizing CpG-1826 and Montanide ISA 720 as adjuvants. 28385608 2017
Entrez Id: 27301
Gene Symbol: APEX2
APEX2
0.010 Biomarker disease BEFREE In this chapter, we outline two proximity labeling systems to circumvent these issues to study (1) eukaryotic proteins that localize to the membrane-bound inclusion formed by Chlamydia trachomatis using BioID, and (2) chlamydial proteins that are inserted into the inclusion membrane using APEX2. 31385281 2019
Entrez Id: 348
Gene Symbol: APOE
APOE
0.010 Biomarker disease BEFREE Determination of APOE genotype showed that patients PCR-negative in all assays, and those positive in the C. trachomatis - and pan-bacteria- (excluding Chlamydia) directed assays, had distributions of the APOE epsilon2, epsilon3 and epsilon4 alleles mirroring those of the general population (i.e. about 8%, 79% and 13%, respectively). 9973579 1999
Entrez Id: 353
Gene Symbol: APRT
APRT
0.040 Biomarker disease BEFREE These results demonstrate that AMP CT is highly sensitive for the detection of C. trachomatis in endocervical specimens and in urine specimens from men and women. 9466747 1998
Entrez Id: 353
Gene Symbol: APRT
APRT
0.040 Biomarker disease BEFREE We compared the Gen-Probe transcription-mediated amplification assay (AMP CT), the Abbott LCx assay, and the Roche COBAS AMPLICOR assay for the detection of Chlamydia trachomatis in a mixed population in urine samples. 9316920 1997
Entrez Id: 353
Gene Symbol: APRT
APRT
0.040 Biomarker disease BEFREE The AMP CT is a sensitive and specific nucleic acid hybridization assay for the detection of C. trachomatis in endocervical swab specimens from women, urethral swab specimens from men, and urine specimens from men and women. 9774570 1998