Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 23152
Gene Symbol: CIC
CIC
0.100 Biomarker group BEFREE CIC fusion-positive sarcoma of the spermatic cord. 30310990 2019
Entrez Id: 85417
Gene Symbol: CCNB3
CCNB3
0.100 Biomarker group BEFREE We also describe the first adult case of MGA-NUTM1 fusion sarcoma, as well as cartilaginous differentiation in a BCOR-CCNB3 fusion sarcoma, which has not been previously reported. 31033080 2019
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.100 Biomarker group BEFREE Exceptionally rapid response to pembrolizumab in a SMARCA4-deficient thoracic sarcoma overexpressing PD-L1: A case report. 31617320 2019
Entrez Id: 54880
Gene Symbol: BCOR
BCOR
0.100 Biomarker group BEFREE The BCOR-CCNB3 positive sarcoma is a recently identified sarcoma morphologically and clinically similar to Ewing sarcoma in adolescents and young adults. 30064235 2019
Entrez Id: 23405
Gene Symbol: DICER1
DICER1
0.100 GeneticVariation group BEFREE Our cases provide further evidence of the link between primary intracranial sarcoma and DICER1 mutation which may form a distinct entity. 31487013 2019
Entrez Id: 100288687
Gene Symbol: DUX4
DUX4
0.100 GeneticVariation group BEFREE The diagnosis of sarcoma with CIC-DUX4 gene fusion is difficult in lack of specific pathological characteristics emphasizing the need for molecular analysis. 28466754 2019
Entrez Id: 2130
Gene Symbol: EWSR1
EWSR1
0.100 Biomarker group BEFREE EWSR1-PATZ1 fusion is a rare event in tumors: it was only reported in six round cell sarcomas and in three gliomas of three exclusively molecular studies. 29679497 2019
Entrez Id: 2130
Gene Symbol: EWSR1
EWSR1
0.100 Biomarker group BEFREE EWSR1-NFATC2 sarcoma is a novel translocation-associated sarcoma. 30994538 2019
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.100 AlteredExpression group BEFREE Exposure of sarcoma and PDX ovarian carcinoma cells to [pazopanib + entinostat] caused a prolonged activation of ERBB1 and transient/prolonged activations of ERBB2, c-KIT, and c-MET, in a cell-specific fashion. 31380285 2019
Entrez Id: 23152
Gene Symbol: CIC
CIC
0.100 Biomarker group BEFREE BCOR-rearranged sarcomas, CIC-fused sarcomas) and describes new groups with common characteristics. 30474142 2019
Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
0.100 Biomarker group BEFREE The findings of the present study support the notion that Wnt/β‑catenin activation may serve a differential role in sarcomas, limiting tumor progression in association with decreased CSC activity. 31180539 2019
Entrez Id: 23152
Gene Symbol: CIC
CIC
0.100 Biomarker group BEFREE The diagnosis of sarcoma with CIC-DUX4 gene fusion is difficult in lack of specific pathological characteristics emphasizing the need for molecular analysis. 28466754 2019
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.100 GeneticVariation group BEFREE <i>EGFR</i>-dependent (T790M and C797S mutations) and independent (Mesenchymal Epithelial Transition [<i>MET</i>] gene amplification, Kirsten Rat Sarcoma [<i>KRAS</i>], Phosphatidyl-Inositol 4,5-bisphosphate 3-Kinase Catalytic subunit Alpha isoform [<i>PI3KCA</i>], and RAF murine sarcoma viral oncogene homolog B1 [<i>BRAF</i>] gene mutations) mechanisms of resistance to EGFR tyrosine kinase inhibitors (TKIs) have been evaluated in plasma samples from NSCLC patients using highly sensitive methods (i.e., digital droplet PCR, Next Generation Sequencing), allowing for the switch to other therapies. 31416192 2019
Entrez Id: 100288687
Gene Symbol: DUX4
DUX4
0.100 Biomarker group BEFREE As far as we are aware, CIC-DUX4 positive primary epidural spinal sarcoma has not been reported. 28474974 2019
Entrez Id: 23152
Gene Symbol: CIC
CIC
0.100 GeneticVariation group BEFREE Primitive round- or spindle-cell EWSR1-negative undifferentiated sarcomas harboring CIC-DUX4 gene fusion are the most common form of Ewing-like sarcomas. 28474974 2019
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.100 GeneticVariation group BEFREE Direct sequencing was historically the gold standard for mutation testing for EGFR, KRAS (Kirsten rat sarcoma viral oncogene homologue) and BRAF (v-Raf murine sarcoma viral oncogene homologue B1) requiring a high ratio of tumour to normal cells, but this has been superseded by more sensitive methods. 30636374 2019
Entrez Id: 54880
Gene Symbol: BCOR
BCOR
0.100 GeneticVariation group BEFREE These include gene fusions in vascular neoplasms (FOSB, CAMTA1 and TFE3), round cell sarcomas (BCOR, DUX4 and WT1), and fibroblastic/myofibroblastic tumors (STAT6, ALK and Pan-TRK); amplifications in well-differentiated and dedifferentiated liposarcomas (MDM2 and CDK4); and deletions in several aggressive neoplasms (SMARCB1 and SMARCA4). 30382607 2019
Entrez Id: 54880
Gene Symbol: BCOR
BCOR
0.100 Biomarker group BEFREE RNA-sequencing data identified one <i>BCOR-CCNB3</i> gene fusion-positive sarcoma occurring in the sacrum of a 17-year-old male patient. 31632552 2019
Entrez Id: 6597
Gene Symbol: SMARCA4
SMARCA4
0.100 Biomarker group BEFREE Identification of SMARCA4-deficient uterine sarcomas may be clinically important due to their aggressive behavior, germline association, and emerging targeted therapies. 31190001 2019
Entrez Id: 4193
Gene Symbol: MDM2
MDM2
0.100 Biomarker group BEFREE MDM2 is known to be altered in various human sarcomas. 31732813 2019
Entrez Id: 238
Gene Symbol: ALK
ALK
0.100 Biomarker group BEFREE In order to better understand the pharmacology and resistance patterns behind three generations of ALK inhibitors, we sought to examine a patient with metastatic anaplastic lymphoma kinase-1-rearranged inflammatory myofibroblastic sarcoma to the brain. 29925295 2019
Entrez Id: 1019
Gene Symbol: CDK4
CDK4
0.100 GeneticVariation group BEFREE Using mouse xenograft models, we found that the co-overexpression of MDM2 and CDK4 in 5H cells with five additional oncogenic mutations can cause proliferative sarcoma with a DDLPS-like morphology in vivo. 31160689 2019
Entrez Id: 54880
Gene Symbol: BCOR
BCOR
0.100 Biomarker group BEFREE More than 50% of cases stained positive for SATB2 and Pax8, raising the hypothesis of a potential use of these markers in the identification of BCOR-CCNB3 positive undifferentiated/unclassified sarcomas. 28420319 2019
Entrez Id: 238
Gene Symbol: ALK
ALK
0.100 Biomarker group BEFREE These include gene fusions in vascular neoplasms (FOSB, CAMTA1 and TFE3), round cell sarcomas (BCOR, DUX4 and WT1), and fibroblastic/myofibroblastic tumors (STAT6, ALK and Pan-TRK); amplifications in well-differentiated and dedifferentiated liposarcomas (MDM2 and CDK4); and deletions in several aggressive neoplasms (SMARCB1 and SMARCA4). 30382607 2019
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 Biomarker group BEFREE Direct sequencing was historically the gold standard for mutation testing for EGFR, KRAS (Kirsten rat sarcoma viral oncogene homologue) and BRAF (v-Raf murine sarcoma viral oncogene homologue B1) requiring a high ratio of tumour to normal cells, but this has been superseded by more sensitive methods. 30636374 2019