Source: ALL
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs387906555
rs387906555
DCC
2 0.923 0.071 18 53526629 missense variant C/A,G,T snp 4.0E-06; 8.0E-06 3.2E-05 0.700 1 1994 1994
dbSNP: rs779998847
rs779998847
APC
1 1.000 0.071 5 112838262 missense variant G/A snp 8.0E-06 0.700 1 1998 1998
dbSNP: rs113488022
rs113488022
BRAF
267 0.407 0.786 7 140753336 missense variant snp 4.0E-06 0.100 0.951 82 2005 2018
dbSNP: rs1801155
rs1801155
APC
31 0.657 0.393 5 112839514 missense variant T/A snp 2.0E-03; 8.0E-06 6.4E-04 0.100 0.708 24 1998 2006
dbSNP: rs397507444
rs397507444
MTHFR
169 0.457 0.714 1 11794407 missense variant T/G snp 0.100 0.813 16 2002 2018
dbSNP: rs1052133
rs1052133
OGG1 ; CAMK1
77 0.533 0.643 3 9757089 missense variant C/G snp 0.27 0.22 0.100 0.714 14 2005 2017
dbSNP: rs121913529
rs121913529
KRAS
70 0.559 0.393 12 25245350 missense variant C/A,G,T snp 4.0E-06 0.100 0.923 13 1999 2017
dbSNP: rs25487
rs25487
XRCC1
119 0.485 0.679 19 43551574 missense variant T/C snp 0.68 0.72 0.100 0.923 13 2000 2015
dbSNP: rs6983267
rs6983267
CASC8 ; CCAT2
24 0.667 0.214 8 127401060 non coding transcript exon variant G/T snp 0.38 0.100 1.000 13 2008 2015
dbSNP: rs1695
rs1695
GSTP1
100 0.510 0.679 11 67585218 missense variant A/G snp 0.34 0.35 0.100 1.000 12 2002 2015
dbSNP: rs4939827
rs4939827
SMAD7
12 0.769 0.107 18 48927093 intron variant T/A,C snp 0.56 0.100 1.000 12 2008 2018
dbSNP: rs1801166
rs1801166
APC
12 0.756 0.179 5 112839543 missense variant G/C snp 4.4E-03 4.3E-03 0.090 0.778 9 2000 2016
dbSNP: rs3802842
rs3802842
COLCA2 ; COLCA1
6 0.846 0.143 11 111300984 intron variant C/A snp 0.70 0.090 1.000 9 2011 2015
dbSNP: rs1801282
rs1801282
PPARG
77 0.543 0.679 3 12351626 missense variant C/G snp 0.11 1.0E-01 0.080 0.875 8 2003 2010
dbSNP: rs1805192
rs1805192
PPARG
75 0.545 0.679 3 12379739 missense variant C/G snp 0.080 0.875 8 2003 2010
dbSNP: rs34612342
rs34612342
MUTYH
20 0.692 0.179 1 45332803 missense variant T/C snp 1.5E-03 1.6E-03 0.080 1.000 8 2003 2015
dbSNP: rs1045642
rs1045642
ABCB1
108 0.520 0.714 7 87509329 synonymous variant A/G,T snp 0.50 0.56 0.070 1.000 7 2008 2018
dbSNP: rs112445441
rs112445441
KRAS
17 0.699 0.286 12 25245347 missense variant snp 0.070 1.000 7 2005 2015
dbSNP: rs1130409
rs1130409
APEX1 ; OSGEP
45 0.590 0.500 14 20456995 missense variant T/A,C,G snp 4.0E-06; 4.0E-06; 0.42 0.44 0.070 1.000 7 2008 2017
dbSNP: rs1801133
rs1801133
MTHFR
86 0.533 0.714 1 11796321 missense variant G/A snp 0.31 0.26 0.070 1.000 7 2006 2018
dbSNP: rs36053993
rs36053993
MUTYH
20 0.699 0.214 1 45331556 missense variant C/T snp 3.0E-03 3.3E-03 0.070 1.000 7 2004 2011
dbSNP: rs11540654
rs11540654
TP53
117 0.492 0.679 17 7676040 missense variant C/A,G,T snp 4.8E-05 3.2E-05 0.060 0.833 6 2006 2013
dbSNP: rs13181
rs13181
ERCC2 ; KLC3
82 0.525 0.536 19 45351661 stop gained T/A,G snp 4.0E-06; 0.32 0.32 0.060 1.000 6 2005 2011
dbSNP: rs17879961
rs17879961
CHEK2
33 0.615 0.321 22 28725099 missense variant A/C,G snp 4.1E-03 1.1E-02 0.060 0.833 6 2006 2013
dbSNP: rs1801131
rs1801131
MTHFR
49 0.599 0.607 1 11794419 missense variant T/G snp 0.29 0.26 0.060 1.000 6 2010 2018