Source: ALL
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs1557612048
rs1557612048
ARID1A
11 0.807 0.200 1 26767868 missense variant T/C snv 0.700 0
dbSNP: rs730882210
rs730882210
MATN4
6 0.827 0.280 20 45304356 missense variant C/G snv 0.700 0
dbSNP: rs199580307
rs199580307
TGIF1
3 0.882 0.160 18 3457498 missense variant T/C snv 2.6E-04 1.1E-04 0.010 1.000 1 2006 2006
dbSNP: rs771803303
rs771803303
TGM2
3 0.882 0.160 20 38148005 missense variant G/A;C;T snv 1.6E-05; 4.1E-06 0.010 1.000 1 2002 2002
dbSNP: rs104894040
rs104894040
SHH
4 0.882 0.160 7 155806509 missense variant A/C;G snv 0.700 0
dbSNP: rs876661330
rs876661330
FGF8 ; LOC105378457
3 0.882 0.160 10 101771522 stop gained G/A snv 4.0E-06 0.700 0
dbSNP: rs121909067
rs121909067
TGIF1
2 0.925 0.120 18 3456525 missense variant C/G snv 0.010 1.000 1 2007 2007
dbSNP: rs1315861554
rs1315861554
TGIF1
2 0.925 0.120 18 3457392 missense variant C/T snv 4.0E-06 0.010 1.000 1 2002 2002
dbSNP: rs587778792
rs587778792
SHH
2 0.925 0.120 7 155811823 missense variant C/G snv 0.710 1.000 1 2005 2005
dbSNP: rs587778799
rs587778799
SHH
2 0.925 0.120 7 155806296 missense variant C/G snv 0.710 1.000 1 2005 2005
dbSNP: rs104894042
rs104894042
SHH
2 0.925 0.120 7 155803618 missense variant A/T snv 0.700 0
dbSNP: rs104894043
rs104894043
SHH
2 0.925 0.120 7 155803613 missense variant C/T snv 4.4E-05 5.6E-05 0.700 0
dbSNP: rs104894044
rs104894044
SHH
2 0.925 0.120 7 155811825 stop gained G/A snv 0.700 0
dbSNP: rs104894045
rs104894045
SHH
2 0.925 0.120 7 155806545 stop gained T/A snv 0.700 0
dbSNP: rs104894046
rs104894046
SHH
2 0.925 0.120 7 155803439 stop gained C/A;T snv 1.5E-05 0.700 0
dbSNP: rs104894048
rs104894048
SHH
2 0.925 0.120 7 155803019 missense variant G/C;T snv 3.7E-05 0.700 0
dbSNP: rs104894050
rs104894050
SHH
2 0.925 0.120 7 155811860 missense variant T/A snv 0.700 0
dbSNP: rs104894051
rs104894051
SHH
2 0.925 0.120 7 155803523 stop gained C/A;G snv 1.5E-05 0.700 0
dbSNP: rs267607047
rs267607047
SHH
2 0.925 0.120 7 155806513 missense variant G/A;T snv 4.0E-06 0.700 0
dbSNP: rs28936675
rs28936675
SHH
2 0.925 0.120 7 155812032 missense variant C/T snv 0.700 0
dbSNP: rs397515364
rs397515364
ZIC2
2 0.925 0.120 13 99985400 frameshift variant -/C delins 0.700 0
dbSNP: rs397515365
rs397515365
ZIC2
2 0.925 0.120 13 99983104 frameshift variant GAGAACC/- delins 0.700 0
dbSNP: rs397515375
rs397515375
SHH
2 0.925 0.120 7 155803481 inframe deletion GCGGCGGTGAGCAGCAGGCGC/- delins 0.700 0
dbSNP: rs397515376
rs397515376
SHH
2 0.925 0.120 7 155803149 inframe deletion GCGCGAAGG/- delins 0.700 0
dbSNP: rs587778805
rs587778805
SHH
2 0.925 0.120 7 155803625 missense variant C/T snv 7.0E-06 0.700 0