Source: ALL
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs4553808
rs4553808
CTLA4
28 0.672 0.320 2 203866282 upstream gene variant A/G;T snv 0.16 0.010 1.000 1 2014 2014
dbSNP: rs4610776
rs4610776
DEFA5
1 1.000 0.040 8 7057155 upstream gene variant A/T snv 0.26 0.010 1.000 1 2018 2018
dbSNP: rs4833079
rs4833079
KLF3-AS1
2 1.000 0.040 4 38653060 intron variant T/C snv 0.30 0.010 1.000 1 2012 2012
dbSNP: rs4837656
rs4837656 		1 1.000 0.040 9 119671775 intergenic variant T/C snv 0.27 0.010 1.000 1 2012 2012
dbSNP: rs4845618
rs4845618
IL6R
5 0.851 0.160 1 154427539 intron variant G/T snv 0.53 0.010 1.000 1 2018 2018
dbSNP: rs6195
rs6195
NR3C1
6 0.807 0.120 5 143399752 missense variant T/A;C snv 0.010 1.000 1 2015 2015
dbSNP: rs6198
rs6198
NR3C1
16 0.724 0.480 5 143278056 3 prime UTR variant T/C snv 0.12 0.010 1.000 1 2015 2015
dbSNP: rs6531656
rs6531656
KLF3
2 1.000 0.040 4 38682580 intron variant C/T snv 0.87 0.010 1.000 1 2012 2012
dbSNP: rs7588571
rs7588571
REG3A
3 0.882 0.040 2 79161461 intron variant G/A snv 0.49 0.010 < 0.001 1 2017 2017
dbSNP: rs9277378
rs9277378
HLA-DPA1 ; HLA-DPB1
5 0.827 0.320 6 33082502 intron variant A/G snv 0.40 0.010 1.000 1 2017 2017
dbSNP: rs9277534
rs9277534
HLA-DPB1
7 0.790 0.280 6 33087030 3 prime UTR variant A/G snv 0.38 0.010 1.000 1 2018 2018
dbSNP: rs1217691063
rs1217691063
MTHFR
614 0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 0.010 1.000 1 2009 2009
dbSNP: rs1367967034
rs1367967034
NOD2
2 1.000 0.040 16 50707959 splice region variant A/G snv 4.0E-06 0.010 1.000 1 2010 2010
dbSNP: rs2910164
rs2910164
MIR146A ; MIR3142HG
193 0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70 0.020 1.000 2 2014 2019
dbSNP: rs749140677
rs749140677
VDR
13 0.752 0.240 12 47857185 missense variant G/A snv 8.0E-06 0.010 1.000 1 2009 2009
dbSNP: rs2302217
rs2302217
MADCAM1
1 1.000 0.040 19 498524 synonymous variant A/C;G snv 1.6E-05; 0.51 0.010 1.000 1 2009 2009
dbSNP: rs352140
rs352140
TLR9
42 0.630 0.680 3 52222681 synonymous variant C/A;G;T snv 2.0E-05; 0.49 0.010 1.000 1 2014 2014
dbSNP: rs11209026
rs11209026
IL23R
46 0.597 0.680 1 67240275 missense variant G/A snv 4.2E-02 4.6E-02 0.010 1.000 1 2008 2008
dbSNP: rs4986791
rs4986791
TLR4
182 0.456 0.840 9 117713324 missense variant C/T snv 5.7E-02 4.9E-02 0.010 1.000 1 2006 2006
dbSNP: rs16910526
rs16910526
CLEC7A ; LOC105369655
12 0.742 0.280 12 10118488 stop gained A/C;G snv 6.2E-02 0.010 1.000 1 2010 2010
dbSNP: rs6897932
rs6897932
IL7R
25 0.683 0.560 5 35874473 missense variant C/T snv 0.23 0.21 0.010 1.000 1 2018 2018
dbSNP: rs1129055
rs1129055
CD86
15 0.724 0.400 3 122119472 missense variant G/A snv 0.30 0.25 0.010 1.000 1 2018 2018
dbSNP: rs7251
rs7251
IRF3
2 0.925 0.080 19 49659652 missense variant C/A;G snv 0.39 0.44 0.010 1.000 1 2013 2013
dbSNP: rs352139
rs352139
TLR9
18 0.732 0.320 3 52224356 intron variant T/C snv 0.51 0.54 0.010 1.000 1 2014 2014