Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1799836
rs1799836
0.010 GeneticVariation BEFREE These results indicate that COMT Val158Met, DBH rs1611115, and MAOB rs1799836 polymorphisms deserve further investigation as genetic markers of AD. 31771069

2020

dbSNP: rs2066713
rs2066713
0.010 GeneticVariation BEFREE SLC6A4 polymorphisms are not associated with the risk of developing major psychiatric disorders (SCZ and BPD); however some signals were detected in ALC (HTTLPR p<sub>d</sub> = 9.25 × 10<sup>-03</sup>, p<sub>r</sub> = 7.24 × 10<sup>-03</sup>; rs2066713 p<sub>d</sub> = 6.35 × 10<sup>-08</sup>; rs25531 p<sub>d</sub> = 2.95 × 10<sup>-02</sup>; rs4251417 p<sub>d</sub> = 2.46 × 10<sup>-03</sup>), and ALZ (rs6354 p<sub>r</sub> = 1.22 × 10<sup>-02</sup>; rs7224199 p<sub>d</sub> = 1.00 × 10<sup>-08</sup>, p<sub>r</sub> = 2.65 × 10<sup>-02</sup>) cohorts. 31595439

2020

dbSNP: rs2234246
rs2234246
0.010 GeneticVariation BEFREE We explored the effect of rs2234246 on AD specific biomarker (amyloid-β PET) to look into the role of this TREM1 locus in AD pathogenesis. 31721052

2020

dbSNP: rs4251417
rs4251417
0.010 GeneticVariation BEFREE SLC6A4 polymorphisms are not associated with the risk of developing major psychiatric disorders (SCZ and BPD); however some signals were detected in ALC (HTTLPR p<sub>d</sub> = 9.25 × 10<sup>-03</sup>, p<sub>r</sub> = 7.24 × 10<sup>-03</sup>; rs2066713 p<sub>d</sub> = 6.35 × 10<sup>-08</sup>; rs25531 p<sub>d</sub> = 2.95 × 10<sup>-02</sup>; rs4251417 p<sub>d</sub> = 2.46 × 10<sup>-03</sup>), and ALZ (rs6354 p<sub>r</sub> = 1.22 × 10<sup>-02</sup>; rs7224199 p<sub>d</sub> = 1.00 × 10<sup>-08</sup>, p<sub>r</sub> = 2.65 × 10<sup>-02</sup>) cohorts. 31595439

2020

dbSNP: rs6354
rs6354
0.010 GeneticVariation BEFREE SLC6A4 polymorphisms are not associated with the risk of developing major psychiatric disorders (SCZ and BPD); however some signals were detected in ALC (HTTLPR p<sub>d</sub> = 9.25 × 10<sup>-03</sup>, p<sub>r</sub> = 7.24 × 10<sup>-03</sup>; rs2066713 p<sub>d</sub> = 6.35 × 10<sup>-08</sup>; rs25531 p<sub>d</sub> = 2.95 × 10<sup>-02</sup>; rs4251417 p<sub>d</sub> = 2.46 × 10<sup>-03</sup>), and ALZ (rs6354 p<sub>r</sub> = 1.22 × 10<sup>-02</sup>; rs7224199 p<sub>d</sub> = 1.00 × 10<sup>-08</sup>, p<sub>r</sub> = 2.65 × 10<sup>-02</sup>) cohorts. 31595439

2020

dbSNP: rs7224199
rs7224199
0.010 GeneticVariation BEFREE SLC6A4 polymorphisms are not associated with the risk of developing major psychiatric disorders (SCZ and BPD); however some signals were detected in ALC (HTTLPR p<sub>d</sub> = 9.25 × 10<sup>-03</sup>, p<sub>r</sub> = 7.24 × 10<sup>-03</sup>; rs2066713 p<sub>d</sub> = 6.35 × 10<sup>-08</sup>; rs25531 p<sub>d</sub> = 2.95 × 10<sup>-02</sup>; rs4251417 p<sub>d</sub> = 2.46 × 10<sup>-03</sup>), and ALZ (rs6354 p<sub>r</sub> = 1.22 × 10<sup>-02</sup>; rs7224199 p<sub>d</sub> = 1.00 × 10<sup>-08</sup>, p<sub>r</sub> = 2.65 × 10<sup>-02</sup>) cohorts. 31595439

2020

dbSNP: rs748703149
rs748703149
0.010 GeneticVariation BEFREE In a whole-exome sequencing study of a family with probable AD-type dementia without pathogenic variants in known autosomal dominant dementia disease genes and negative for the apolipoprotein E (APOE) ε4 allele, we identified an extremely rare TREM2 coding variant, that is, a glycine-to-tryptophan substitution at amino acid position 145 (NM_018965.3:c.433G>T/p.[Gly145Trp]). 31464095

2020

dbSNP: rs766647311
rs766647311
0.010 GeneticVariation BEFREE In a whole-exome sequencing study of a family with probable AD-type dementia without pathogenic variants in known autosomal dominant dementia disease genes and negative for the apolipoprotein E (APOE) ε4 allele, we identified an extremely rare TREM2 coding variant, that is, a glycine-to-tryptophan substitution at amino acid position 145 (NM_018965.3:c.433G>T/p.[Gly145Trp]). 31464095

2020

dbSNP: rs766647311
rs766647311
0.010 GeneticVariation BEFREE Our results, suggest that a p.(Gly145Trp)-induced structural disturbance and functional impairment of TREM2 may contribute to the pathogenesis of an AD-like form of dementia. 31464095

2020

dbSNP: rs10046
rs10046
0.010 GeneticVariation BEFREE In addition, our results demonstrated that homozygous TT genotype in rs10046, dominant AA and AG genotypes in rs767199, homozygous TT genotype in rs727479, and dominant TT and TA genotypes in rs1143704 might be the susceptibility genotypes for AD, while no associations were observed between rs1065778, rs1062033, rs1008805, and rs700519 polymorphisms and AD susceptibility. 31278540

2019

dbSNP: rs10051644
rs10051644
0.010 GeneticVariation BEFREE Haplotype analysis indicated that the T-A-C-A-T-C-C and T-G-C-A-T-C-C haplotypes in the southwestern cohort and the T-G-C-G-C-T-C haplotype in the eastern cohort, consisting of rs10051644, rs6869634, rs3797617, rs3756577, rs4958445, rs10515639 and rs6881743, showed a significant association with AD (<i>P</i> = 0.037, <i>P</i> = 0.026 and <i>P</i> = 0.045, respectively). 31031618

2019

dbSNP: rs1008805
rs1008805
0.010 GeneticVariation BEFREE Association between rs10046, rs1143704, rs767199, rs727479, rs1065778, rs1062033, rs1008805, and rs700519 polymorphisms in aromatase (CYP19A1) gene and Alzheimer's disease risk: a systematic review and meta-analysis involving 11,051 subjects. 31278540

2019

dbSNP: rs10139154
rs10139154
0.010 GeneticVariation BEFREE The current study provides preliminary </span>evidence of the involvement of SCFD1 rs10139154 in the risk of developing AD. 31267315

2019

dbSNP: rs10164112
rs10164112
0.010 GeneticVariation BEFREE However, in combination with the <i>APOE</i> ε4 allele, the rs10164112-T allele has been found to be a risk factor for AD in the Han Chinese population reported in this study. 30666118

2019

dbSNP: rs10399931
rs10399931
0.010 GeneticVariation BEFREE Polymorphisms of the CHI3L1 gene (rs4950928 C>G and rs10399931 C>T) are associated with the risk and prognosis of AD and can affect the expression of CHI3L1 in plasma. 30223258

2019

dbSNP: rs1041833271
rs1041833271
APP
0.010 GeneticVariation BEFREE Neuropathologic and molecular studies in brains of carriers of the PSEN1 p.A396T mutation or other PSEN1 or PSEN2 mutations associated with the coexistence of DLBD and AD are needed to clarify whether tau and α-synuclein proteinopathies occur independently or whether a relationship exists between α-synuclein and tau that might explain the mechanisms of coaggregation. 31165862

2019

dbSNP: rs10515639
rs10515639
0.010 GeneticVariation BEFREE Haplotype analysis indicated that the T-A-C-A-T-C-C and T-G-C-A-T-C-C haplotypes in the southwestern cohort and the T-G-C-G-C-T-C haplotype in the eastern cohort, consisting of rs10051644, rs6869634, rs3797617, rs3756577, rs4958445, rs10515639 and rs6881743, showed a significant association with AD (<i>P</i> = 0.037, <i>P</i> = 0.026 and <i>P</i> = 0.045, respectively). 31031618

2019

dbSNP: rs10792421
rs10792421
0.010 GeneticVariation BEFREE Further, we identified two novel loci jointly associated with AD and BIP implicating the <i>MARK2</i> gene (lead SNP rs10792421, conjunctional FDR = 0.030, same direction of effect) and the <i>VAC14</i> gene (lead SNP rs11649476, conjunctional FDR = 0.022, opposite direction of effect). 30930738

2019

dbSNP: rs1126680
rs1126680
0.010 GeneticVariation BEFREE We found synergy between APOE-ε4 and SNPs localized in 5'UTR (rs1126680) and in intron 2 (rs55781031) of the BCHE-K allele (rs1803274) in 18% of patients with late-onset AD (n = 55). 30914707

2019

dbSNP: rs113145702
rs113145702
APP
0.010 GeneticVariation BEFREE Our findings suggest that both I249L and P433S are pathogenic for early onset of AD by increasing Aβ42 production and Aβ42/Aβ40 ratios. 31235249

2019

dbSNP: rs1143704
rs1143704
0.010 GeneticVariation BEFREE In addition, our results demonstrated that homozygous TT genotype in rs10046, dominant AA and AG genotypes in rs767199, homozygous TT genotype in rs727479, and dominant TT and TA genotypes in rs1143704 might be the susceptibility genotypes for AD, while no associations were observed between rs1065778, rs1062033, rs1008805, and rs700519 polymorphisms and AD susceptibility. 31278540

2019

dbSNP: rs11649476
rs11649476
0.010 GeneticVariation BEFREE Further, we identified two novel loci jointly associated with AD and BIP implicating the <i>MARK2</i> gene (lead SNP rs10792421, conjunctional FDR = 0.030, same direction of effect) and the <i>VAC14</i> gene (lead SNP rs11649476, conjunctional FDR = 0.022, opposite direction of effect). 30930738

2019

dbSNP: rs1200601649
rs1200601649
APP
0.010 GeneticVariation BEFREE We identified two novel mutations of <i>PSEN1</i> (Y256N and H214R) in samples from these families, and a <i>de novo</i> mutation of <i>PSEN1</i> (G206V) in a patient with very early-onset sporadic Alzheimer's disease. 31440394

2019

dbSNP: rs1220355764
rs1220355764
APP
0.010 GeneticVariation BEFREE Generation of an integration-free iPSC line, ICCSICi006-A, derived from a male Alzheimer's disease patient carrying the PSEN1-G206D mutation. 31627126

2019

dbSNP: rs1287723181
rs1287723181
APP
0.010 GeneticVariation BEFREE PSEN1 p.L226R was found in an early-onset AD (EOAD) family characterized by language impairment at disease onset, a novel probably pathogenetic variant (p.D534H) was identified in a frontal-temporal dementia gene, TANK-binding kinase 1 (TBK1) with a typical AD phenotype in a late-onset AD (LOAD) family, and a PSEN2p.H169N mutation and two benign MAPT (p.Q230R and p.V48L) mutations were detected in three EOAD patients. 30549411

2019