Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs25487
rs25487
0.030 GeneticVariation BEFREE We detected the distributions of three single-nucleotide polymorphisms (XRCC1 Arg399Gln, XRCC3 Thr241Met and XPD Lys751Gln) in DNA repair genes, and assessed the associations of these genetic polymorphisms with colon and rectal cancer susceptibility as well as evaluated the interactions of gene-gene and gene-environment in a case-control study of an Indian population. 20229274

2010

dbSNP: rs13181
rs13181
0.030 GeneticVariation BEFREE We genotyped 1,181 controls and 311 cases (180 colon and 131 rectal cancer) for SNPs in the XRCC1 (Arg194Trp, Arg399Gln), OGG1 (Ser326Cys), PARP (Val762Ala, Lys940Arg), and XPD (Asp312Asn, Lys751Gln) genes. 20559012

2009

dbSNP: rs13181
rs13181
0.030 GeneticVariation BEFREE These interactions were stronger for rectal cancer cases (heterogeneity test P = 0.002 for XPD Asp312Asn and P = 0.03 for XPD Lys751Gln) and remained statistically significant after accounting for multiple testing. 19029193

2009

dbSNP: rs1131691014
rs1131691014
0.020 GeneticVariation BEFREE Thus, our current meta-analysis indicates no evidence for the association between the p53 Arg72Pro polymorphism and CRC risk in the Asian population, but significant association in Chinese population, especially for rectal cancer and in men. 30316510

2018

dbSNP: rs878854066
rs878854066
0.020 GeneticVariation BEFREE Thus, our current meta-analysis indicates no evidence for the association between the p53 Arg72Pro polymorphism and CRC risk in the Asian population, but significant association in Chinese population, especially for rectal cancer and in men. 30316510

2018

dbSNP: rs1131691014
rs1131691014
0.020 GeneticVariation BEFREE These results suggest that the TP53 Arg72Pro polymorphism CC genotype may contribute to an increased risk of CRC, especially for rectal cancer and among Asians. 27901479

2017

dbSNP: rs878854066
rs878854066
0.020 GeneticVariation BEFREE These results suggest that the TP53 Arg72Pro polymorphism CC genotype may contribute to an increased risk of CRC, especially for rectal cancer and among Asians. 27901479

2017

dbSNP: rs4939827
rs4939827
0.020 GeneticVariation BEFREE A significant association of SNP in SMAD7 rs4939827 and CHI3L1 rs4950928 was revealed between the rectal cancer and colon cancer patients. 26779637

2016

dbSNP: rs671
rs671
0.020 GeneticVariation BEFREE Our study supports that ALDH-2 Glu487Lys polymorphism is associated with significant reduced risks of CRC in population-based samples, and of rectal cancer in males. 25573590

2015

dbSNP: rs4939827
rs4939827
0.020 GeneticVariation BEFREE We examined whether inherited risk variants at rs10795668, rs3802842, rs6983267, and rs4939827 exerted a differential effect on colon and rectal cancers in a Romanian hospital based series of 153 CRC cases and 182 non-affected control subjects prospectively recruited between 2007 and 2010. 22457859

2012

dbSNP: rs1801282
rs1801282
0.020 GeneticVariation BEFREE PPAR-gamma 34 C>G is associated with colon cancer risk, but not associated with CRC and rectal cancer risk. 20440859

2010

dbSNP: rs1805192
rs1805192
0.020 GeneticVariation BEFREE PPAR-gamma 34 C>G is associated with colon cancer risk, but not associated with CRC and rectal cancer risk. 20440859

2010

dbSNP: rs3802842
rs3802842
0.020 GeneticVariation BEFREE At 11q23.1, rs3802842 was significantly associated with rectal cancer risk only among African Americans (odds ratio, 1.34; P = .01); this observation was made in previous studies. 20659471

2010

dbSNP: rs3802842
rs3802842
0.020 GeneticVariation BEFREE Furthermore, we found that rs10795668 was associated with increased risk only in rectal cancer but not colon cancer, and rs3802842 was also significantly associated with advanced stages of CRC. 20530476

2010

dbSNP: rs1801282
rs1801282
0.020 GeneticVariation BEFREE P12A PPARgamma did not significantly interact with BMI, WHR, energy intake, and energy expenditure to alter risk of colon or rectal cancer. 15860437

2005

dbSNP: rs1805192
rs1805192
0.020 GeneticVariation BEFREE P12A PPARgamma did not significantly interact with BMI, WHR, energy intake, and energy expenditure to alter risk of colon or rectal cancer. 15860437

2005

dbSNP: rs671
rs671
0.020 GeneticVariation BEFREE However, with the rectal cancer analysis, the ORs for high alcohol consumption were greater with 487Glu/Lys genotype compared with Glu/Glu, albeit not. 12033531

2002

dbSNP: rs2189517
rs2189517
0.010 GeneticVariation BEFREE Rs1800734 (in MLH1 gene) was associated with colon cancer risk (p-value = 3.5 × 10<sup>-6</sup> ) and rs2189517 (in RAD51B) with rectal cancer risk (p-value = 5.7 × 10<sup>-6</sup> ). 31209889

2020

dbSNP: rs10484879
rs10484879
0.010 GeneticVariation BEFREE Higher rs2275913 and rs10484879, and reduced rs3804513 MAF were seen in rectal cancer (RC) tolerant to FOLFOX (T+) compared to (T-) patients. 31138901

2019

dbSNP: rs187115
rs187115
0.010 GeneticVariation BEFREE Here, we comprehensively examined the association between CD44 rs187115 variant and cancer risk (breast cancer, cervical cancer, lung cancer, gastric cancer, liver cancer, colon cancer, and rectal cancer) in a central Chinese population. 30860617

2019

dbSNP: rs2275913
rs2275913
0.010 GeneticVariation BEFREE Higher rs2275913 and rs10484879, and reduced rs3804513 MAF were seen in rectal cancer (RC) tolerant to FOLFOX (T+) compared to (T-) patients. 31138901

2019

dbSNP: rs2632159
rs2632159
0.010 GeneticVariation BEFREE A more pronounced effect was observed in the male subgroup in that <i>PCAT1</i> rs2632159 SNP increased rectal cancer risk by 3.97-fold (<i>P</i>=0.017). 31253700

2019

dbSNP: rs3748067
rs3748067
0.010 GeneticVariation BEFREE Strong association of rs3819025, rs3804513, and rs7747909 was found with tolerance to RC treatment. rs3748067 was associated with FOLFOX tolerance in CC but not RC. 31138901

2019

dbSNP: rs3804513
rs3804513
0.010 GeneticVariation BEFREE Strong association of rs3819025, rs3804513, and rs7747909 was found with tolerance to RC treatment. rs3748067 was associated with FOLFOX tolerance in CC but not RC. 31138901

2019

dbSNP: rs5743030
rs5743030
0.010 GeneticVariation BEFREE Meanwhile, PMS1 rs4920657, rs5743030, and rs5743100 were associated with overall survival (OS) time of rectal cancer. 30590005

2019