Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1136545
rs1136545
0.010 GeneticVariation BEFREE The additional five SNPs revealed that rs7607888 (P = 2.03 × 10<sup>-7</sup>), rs55981318 (P = 0.018), and rs1136545 (P = 1.93 × 10<sup>-9</sup>) were also associated with T1D. 29204916

2018

dbSNP: rs143383
rs143383
0.010 GeneticVariation BEFREE Stratified analyses based on disease type showed a significant association between the GDF5 rs143383 polymorphism and increased risk of IDD and OA under all genetic models studied. 30217184

2018

dbSNP: rs1437184398
rs1437184398
0.010 GeneticVariation BEFREE Here, we report a novel recessive GPT2 stop mutation p.Gln24* causing a complex IDD phenotype in a homozygous state in 5 patients from 2 consanguineous Arab families. 29882329

2018

dbSNP: rs147846074
rs147846074
0.010 GeneticVariation BEFREE A genetic variant in the SAND domain of autoimmune regulator (AIRE), R247C, was identified in a patient with type I diabetes mellitus (T1DM) and his mother with rheumatoid arthritis. 29129473

2018

dbSNP: rs1893592
rs1893592
0.010 GeneticVariation BEFREE This reduction in UBASH3A, as a consequence of the minor allele at rs1893592</span>, resulted in increased secretion of IL-2, a key cytokine that is required for T-cell activation and function but is deficient in some T1D subjects. 29491471

2018

dbSNP: rs1902491
rs1902491
0.010 GeneticVariation BEFREE The Association of CEP135 rs4865047 and NPY2R rs1902491 Single Nucleotide Polymorphisms (SNPs) with Rapid Progression of Proliferative Diabetic Retinopathy in Patients with Type 1 Diabetes Mellitus. 30531682

2018

dbSNP: rs199946797
rs199946797
0.010 GeneticVariation BEFREE In a recent sequencing study, an individual with juvenile-onset diabetes was observed to be homozygous for a rare missense variant (c.1672C>T, p.R558C) in the WFS1 gene. 30014265

2018

dbSNP: rs4506565
rs4506565
0.010 GeneticVariation BEFREE We studied TrialNet participants with newly diagnosed autoimmune type 1 diabetes with available <i>TCF7L2</i> rs4506565 and rs7901695 SNP data (<i>n</i> = 810; median age 13.6 years; range 3.3-58.6). 29025879

2018

dbSNP: rs4673
rs4673
0.010 GeneticVariation BEFREE We showed a strong association of the CYBA polymorphism rs4673 with DPN in Slovak children and adolescents with T1D. 29924645

2018

dbSNP: rs4865047
rs4865047
0.010 GeneticVariation BEFREE The Association of CEP135 rs4865047 and NPY2R rs1902491 Single Nucleotide Polymorphisms (SNPs) with Rapid Progression of Proliferative Diabetic Retinopathy in Patients with Type 1 Diabetes Mellitus. 30531682

2018

dbSNP: rs55981318
rs55981318
0.010 GeneticVariation BEFREE The additional five SNPs revealed that rs7607888 (P = 2.03 × 10<sup>-7</sup>), rs55981318 (P = 0.018), and rs1136545 (P = 1.93 × 10<sup>-9</sup>) were also associated with T1D. 29204916

2018

dbSNP: rs61734651
rs61734651
0.010 GeneticVariation BEFREE Mutations in COL9A3 gene sequence, leading to an Arg103Trp substitution in its 3 chain (the Trp3 allele at rs61734651 site), respectively, have been found to be connected with IDD occurrence in several studies. 30342505

2018

dbSNP: rs6422747
rs6422747
0.010 GeneticVariation BEFREE G allele in both SNPs was associated with a higher risk of IDD.The 2 SNPs (rs6422747 and rs6422748) in the THBS2 gene were associated with susceptibility of IDD but not severity of IDD in a Chinese Han population. 29480856

2018

dbSNP: rs6422748
rs6422748
0.010 GeneticVariation BEFREE G allele in both SNPs was associated with a higher risk of IDD.The 2 SNPs (rs6422747 and rs6422748) in the THBS2 gene were associated with susceptibility of IDD but not severity of IDD in a Chinese Han population. 29480856

2018

dbSNP: rs72975913
rs72975913
0.010 GeneticVariation BEFREE Although these SNPs were not associated with type 1 diabetes overall (p > 0.001), the SNP most associated with AAD, rs72975913, was associated with susceptibility to type 1 diabetes in those individuals diagnosed at less than 5 years old (p = 2.3 × 10<sup>-9</sup>). 28983737

2018

dbSNP: rs75352297
rs75352297
0.010 GeneticVariation BEFREE The established T1D SNPs rs1159465 (near IL2RA) and rs75352297 (near CCR2 and CCR3) were positively associated with IL-2Rα and CCL4, respectively (P < .01). 29266506

2018

dbSNP: rs7607888
rs7607888
0.010 GeneticVariation BEFREE The additional five SNPs revealed that rs7607888 (P = 2.03 × 10<sup>-7</sup>), rs55981318 (P = 0.018), and rs1136545 (P = 1.93 × 10<sup>-9</sup>) were also associated with T1D. 29204916

2018

dbSNP: rs763110
rs763110
0.010 GeneticVariation BEFREE Meta-analysis of FASL-844C/T (rs763110) polymorphism was statistically associated with decreased IDD risk under all genetic models (allele model: OR = 0.68, 95% CI 0.59-0.80, P = 0.000; homozygote model: OR = 0.35, 95% CI 0.25-0.53, P = 0.000; dominant model: OR = 0.38, 95% CI 0.25-0.58, P = 0.000; recessive model: OR = 0.69, 95% CI 0.58-0.84, P = 0.000). 29652777

2018

dbSNP: rs12512631
rs12512631
0.010 GeneticVariation BEFREE Associations between serum 25OHD concentration and 2 SNPs, one in the vitamin D receptor (VDR) gene (rs4516035) and one in the group-specific component (GC) gene (rs12512631), were stronger during pregnancy in mothers whose children later developed type 1 diabetes than in mothers whose children did not (pinteraction = 0.03, 0.02, respectively). 28976992

2017

dbSNP: rs17583959
rs17583959
0.010 GeneticVariation BEFREE When haplotypes were constructed between CREM polymorphisms (rs1148247, rs17583959, rs2384352), AGA haplotype (H2) was significantly over-transmitted from parents to affected offspring (Z score=2.988; P=0.002) and may confer a risk for T1D disease. 27840176

2017

dbSNP: rs1950942
rs1950942
0.010 GeneticVariation BEFREE Notably, we found that the SNP with the highest association with T1D susceptibility and IgG autoantibody reactivity (rs1950942) was also associated with anti-GAD IgM reactivity in T1D patients (P = 5.98E-03) and in non-affected parents (P = 4.17E-03). 28534223

2017

dbSNP: rs2384352
rs2384352
0.010 GeneticVariation BEFREE When haplotypes were constructed between CREM polymorphisms (rs1148247, rs17583959, rs2384352), AGA haplotype (H2) was significantly over-transmitted from parents to affected offspring (Z score=2.988; P=0.002) and may confer a risk for T1D disease. 27840176

2017

dbSNP: rs2910164
rs2910164
0.010 GeneticVariation BEFREE MiR-146a rs2910164 and miR-155 rs767649 polymorphisms were associated with protection for T1DM. 28101643

2017

dbSNP: rs4613763
rs4613763
0.010 GeneticVariation BEFREE We found one allele on chromosome 5, rs4613763 mapping to a Prostaglandin Receptor EP4 (PTGER4) to reach statistical significance (P = .0067), in determining a larger proportion of T1DM patients with a detectable honeymoon phase. 27503178

2017

dbSNP: rs4622308
rs4622308
0.010 GeneticVariation BEFREE The authors identified one genome-wide significant locus on chromosome 12 (rs4622308) in a region harboring a previously reported type 1 diabetes and autoimmune disorder locus. 28494655

2017