Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs199473373
rs199473373
T 0.700 CausalMutation CLINVAR

dbSNP: rs77375493
rs77375493
0.060 GeneticVariation BEFREE Although investigation for JAK2 V617F mutation is recommended in patients presenting with splanchnic venous thrombosis (SVT), no specific clinical advice is given to SVT patients presenting without myeloproliferative neoplasms (MPN) and JAK2 V617F mutation. 23916380

2013

dbSNP: rs77375493
rs77375493
0.060 GeneticVariation BEFREE Recent research has demonstrated in patients with MPN the existence of factors increasing the risk of SVT such as the presence of the JAK2 V617F mutation and its 46/1 haplotype. 23855810

2013

dbSNP: rs77375493
rs77375493
0.060 GeneticVariation BEFREE In addition, our findings in JAK2(V617F)-negative SVT patients indicate an important role for the 46/1 haplotype in the etiology and diagnosis of SVT-related MPNs, independent of JAK2(V617F), that requires further exploration. 21364191

2011

dbSNP: rs77375493
rs77375493
0.060 GeneticVariation BEFREE Data from a larger number of patients with long-term follow-up are needed to reveal the clinical relevancy of JAK2 V617F in Korean patients with SVT. 21435189

2011

dbSNP: rs77375493
rs77375493
0.060 GeneticVariation BEFREE Anticoagulation is the treatment of choice for all SVT and proper treatment of the MPD is recommended in patients with SVT associated with the JAK2(V617F) mutation. 19478480

2009

dbSNP: rs77375493
rs77375493
0.060 GeneticVariation BEFREE Anticoagulation therapy combined with low-dose aspirin and proper treatment of the MPD is recommended in patients with SVT associated with the JAK2(V617F) mutation. 17687555

2007

dbSNP: rs10974944
rs10974944
0.010 GeneticVariation BEFREE In the overall analysis, it was found that the JAK2 46/1 haplotype significantly elevated the risk of MPNs (rs10974944: C vs T: odds ratio (OR) = 2.19, 95 % confidence interval (CI) = 1.86-2.57, P < 0.0001; CC vs TT: OR = 4.63, 95 % CI = 3.32-6.47, P < 0.0001; CT vs TT: OR = 2.49, 95 % CI = 2.11-2.95, P < 0.0001; (CC + CT) vs TT: OR = 2.92, 95 % CI = 2.51-3.39, P < 0.0001; rs12343867: C vs T: OR = 1.88, 95 % CI = 1.59-2.22, P < 0.0001; CC vs TT: OR = 3.16, 95 %CI = 2.14-4.65, P < 0.0001; CT vs TT: OR = 2.04, 95 % CI = 1.51-2.74, P < 0.0001; (CC + CT) vs TT: OR = 2.25, 95 % CI = 1.73-2.95, P < 0.0001) and SVT (C vs T: OR = 1.27, 95 % CI = 1.06-1.52, P = 0.011; CC vs TT: OR = 2.33, 95 % CI = 1.42-3.81, P = 0.001; (CC + CT) vs TT: OR = 1.25, 95 % CI = 1.02-1.53, P = 0.034). 25015051

2014

dbSNP: rs12343867
rs12343867
0.010 GeneticVariation BEFREE There was no evidence of a significant association between the rs12343867 and the risk of SVT in the genetic model (CT vs TT: OR = 1.01, 95 % CI = 0.80-1.29, P = 0.906). 25015051

2014

dbSNP: rs1217691063
rs1217691063
0.010 GeneticVariation BEFREE Our results suggest that HH and the homozygous genotype in the MTHFR C677T mutation do not seem to play a role in SVT development. 21070369

2011

dbSNP: rs1265538677
rs1265538677
0.010 GeneticVariation BEFREE In a multicenter case-control study on 118 patients with SVT (39 Budd-Chiari syndrome and 85 portal vein thrombosis) and 118 population-based controls, the relationship of SVT with single nucleotide polymorphisms (SNPs) and haplotypes in the TAFI gene (-438G/A, Ala147Thr, Thr325Ile and 1583A/T) was determined. 17264944

2007

dbSNP: rs3742264
rs3742264
0.010 GeneticVariation BEFREE Haplotype analysis confirmed that the Ala147Thr SNP has the strongest association with risk of SVT. 17264944

2007