Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs10004195
rs10004195
0.010 GeneticVariation BEFREE We identified that two SNPs, rs165501 (OR = 1.20, P = 0.0008, IRAK2) and rs10004195 (OR = 1.23, P = 0.0001, TLR10), were identified to be significantly associated with HD. 31073143

2019

dbSNP: rs1042522
rs1042522
0.010 GeneticVariation BEFREE For the Pro72Arg (rs 1042522) SNP we found these rates in HT patients: 11.4% wild-type C/C (Pro72Pro), 24.0% heterozygous G/C (Pro72Arg), 64.6% homozygous G/G (Arg72Arg). 25935255

2015

dbSNP: rs1053005
rs1053005
0.010 GeneticVariation BEFREE The allele A from rs1053005 was significantly less frequent in both GD and HT patients (P = 0.0024, OR = 0.6958, 95%CI = 0.5508-0.8788; P = 0.0091, OR = 0.7013, 95%CI = 0.5397-0.9112, respectively). 24081513

2013

dbSNP: rs1059703
rs1059703
0.010 GeneticVariation BEFREE In Hashimoto's thyroiditis (HT) patients, a significantly increased risk of T allele in rs1059703 was found. 25458699

2015

dbSNP: rs1061501
rs1061501
0.010 GeneticVariation BEFREE Moreover, a genetic effect of rs1061501 on regulating serum IFN-α production was observed in HT. 31494956

2019

dbSNP: rs10774625
rs10774625
0.010 GeneticVariation BEFREE Three genetic variants showed nominal association with HT; rs10774625 in ATXN2 gene (p = 0.0149, OR = 0.73, CI = 0.56-0.94), rs7171171 near RASGRP1 gene (p = 0.0356, OR = 1.4, CI = 1.02-1.92) and rs11675434 in TPO gene (p = 0.041, OR = 1.31, CI = 1.01-1.69). 27268232

2016

dbSNP: rs1085308054
rs1085308054
C 0.700 CausalMutation CLINVAR

dbSNP: rs111033243
rs111033243
0.010 GeneticVariation BEFREE The p.F354S variation was identified both among patients (1~HT and 3 GD) and healthy subjects (n=5). 21045265

2010

dbSNP: rs1131691014
rs1131691014
0.010 GeneticVariation BEFREE For the Pro72Arg (rs 1042522) SNP we found these rates in HT patients: 11.4% wild-type C/C (Pro72Pro), 24.0% heterozygous G/C (Pro72Arg), 64.6% homozygous G/G (Arg72Arg). 25935255

2015

dbSNP: rs1133076
rs1133076
TG
0.010 GeneticVariation BEFREE We studied six polymorphisms distributed throughout all the thyroglobulin gene: four microsatellites (Tgms1, Tgms2, TGrI29 and TGrI30), one insertion/deletion (Indel) polymorphism (IndelTG-IVS18) and one exonic single nucleotide polymorphism (SNP) (c.7589G>A) in 122 patients with autoimmune thyroiditis compared with 100 non-related normal subjects. 20960158

2010

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE BRAF(V600E) mutation is associated with a more advanced PTC at diagnosis; however, its role in the clinicopathological characteristics of PTC with concurrent HT is unknown. 23469895

2013

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE Association between BRAF V600E Mutation and Ultrasound Features in Papillary Thyroid Carcinoma Patients with and without Hashimoto's Thyroiditis. 28687736

2017

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE The pooled analysis indicated that age<45 years (OR = 1.57, 95%CI:1.48-1.66, P < 0.001), male gender (OR = 1.79, 95%CI: 1.69-1.91, P < 0.001), tumor size>10 mm (OR = 2.61, 95%CI:2.27-3.00, P < 0.001), bilaterality (OR = 1.52, 95%CI:1.31-1.77, P < 0.001), multifocality (OR = 1.46, 95%CI: 1.31-1.61, P < 0.001), extracapsular invasion (OR = 2.10, 95%CI:1.81-2.43, P < 0.001), angiolymphatic invasion (OR = 8.02, 95%CI:5.00-12.87, P < 0.001), high histologic risk (OR = 2.62, 95%CI:2.13-3.22, P < 0.001) and BRAF(V600E) mutation (OR:1.78, 95%CI:1.38-2.30, P < 0.001) were significantly associated with CLNM, and upper third location (OR = 0.54, 95%CI:0.43-0.67, P < 0.001) and lymphocytic thyroiditis (OR = 0.64, 95%CI:0.42-0.97, P = 0.034) were decreased risk factors of CLNM. 26944586

2016

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE Clinical and pathological features and the BRAF(V600E) mutation in patients with papillary thyroid carcinoma with and without concurrent Hashimoto thyroiditis. 19014278

2009

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE Our results show that HT in patients with PTC is associated with a low probability of BRAF (V600E) mutations. 25312294

2015

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE Screening for activating BRAF mutations in a series of 83 PTCs identified the most common V600E mutation in 39 cases (histologically, 38 classic PTCs and 1 sclerosing variant PTC) and a complex in-frame mutation involving amino acids V600-S605 in a stage III multicentric follicular variant PTC, occurring in a 50-year-old female patient, who was affected by hypothyroidism in autoimmune thyroiditis and had a family history of PTC and autoimmune thyroiditis. 18426810

2008

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE Hashimoto's thyroiditis and BRAF(V600E) status may help to predict clinical outcome of PTC. 25213729

2016

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE BRAF V600E mutation could be demonstrated at significantly lower rates in cases of PTC + HT (32.1 vs 60.7%, p < 0.005). 30666518

2019

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE These results indicate that BRAF(V600E) assessment by pyrosequencing is a reliable assay useful to refine inconclusive cytology of thyroid nodules also in the presence of concurrent HT. 23775008

2014

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE In addition, Hashimoto's thyroiditis was related to less lymph node metastasis and extrathyroidal extension in PTCs with BRAF(V600E) mutation. 26041461

2016

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE This meta-analysis confirmed significant associations between BRAF(V600E) mutation and female gender, multifocality, ETE, LNM, TNM stage, concomitant hashimoto thyroiditis, vascular invasion and recurrence/persistence, suggesting the predictive value of BRAF(V600E) mutation for PTC prognosis. 26871894

2016

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE Chronic lymphocytic thyroiditis and BRAF V600E in papillary thyroid carcinoma. 26598713

2016

dbSNP: rs1143627
rs1143627
0.010 GeneticVariation BEFREE To evaluate the hypothesis that the functional -31C/T polymorphism (rs1143627) in the gene encoding IL-1beta is associated with the intractability and the severity of autoimmune thyroid diseases, we genotyped this polymorphism in 64 patients with intractable Graves' disease (GD), 28 GD patients in remission, 49 patients with Hashimoto's disease (HD) who developed hypothyroidism (severe HD), 28 untreated euthyroid HD patients (mild HD) and 59 healthy volunteers. 19793334

2009

dbSNP: rs11568820
rs11568820
VDR
0.010 GeneticVariation BEFREE Another functional polymorphism of the <i>VDR</i> gene, rs11568820 (Cdx2), has been shown to influence the immune system, although it has not been studied for its association with autoimmune thyroiditis to date. 31531369

2019

dbSNP: rs11571297
rs11571297
G 0.700 GeneticVariation GWASCAT Seven newly identified loci for autoimmune thyroid disease. 22922229

2012