Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs11571297
rs11571297
G 0.700 GeneticVariation GWASCAT Seven newly identified loci for autoimmune thyroid disease. 22922229

2012

dbSNP: rs12507813
rs12507813
G 0.700 GeneticVariation GWASCAT Genome-wide association analysis suggests novel loci underlying thyroid antibodies in Hashimoto's thyroiditis. 30926877

2019

dbSNP: rs12551356
rs12551356
G 0.700 GeneticVariation GWASCAT Genome-wide association analysis suggests novel loci underlying thyroid antibodies in Hashimoto's thyroiditis. 30926877

2019

dbSNP: rs4409785
rs4409785
C 0.700 GeneticVariation GWASCAT Seven newly identified loci for autoimmune thyroid disease. 22922229

2012

dbSNP: rs57348955
rs57348955
G 0.700 GeneticVariation GWASCAT Seven newly identified loci for autoimmune thyroid disease. 22922229

2012

dbSNP: rs6972286
rs6972286
A 0.700 GeneticVariation GWASCAT Genome-wide association analysis suggests novel loci underlying thyroid antibodies in Hashimoto's thyroiditis. 30926877

2019

dbSNP: rs977706
rs977706
A 0.700 GeneticVariation GWASCAT Genome-wide association analysis suggests novel loci underlying thyroid antibodies in Hashimoto's thyroiditis. 30926877

2019

dbSNP: rs12944194
rs12944194
0.010 GeneticVariation BEFREE We identified three variants suggestively associated with HT: rs12944194 located 206 kb from SDK2 (P = 1.8 × 10<sup>-6</sup>), rs75201096 inside GNA14 (P = 2.41 × 10<sup>-5</sup>) and rs791903 inside IP6K3 (P = 3.16 × 10<sup>-5</sup>). 30284222

2019

dbSNP: rs17445836
rs17445836
0.010 GeneticVariation BEFREE rs17445836 of IRF8 is a possible genetic variant associated with the development of HT. rs17445836 was associated with the production of thyroid antibody, and the GG genotype of rs17445836 was associated with a higher AmiA titre than the GA genotype. 25989711

2015

dbSNP: rs2736340
rs2736340
0.010 GeneticVariation BEFREE At the same time, lower frequencies of the C allele of rs2736340 of BLK in GD (P = 0.025, OR = 0.76, 95% CI = 0.60-0.97) and HT (P = 0.003, OR = 0.53, 95% CI = 0.35-0.81) than the controls were also observed. 30589937

2019

dbSNP: rs6887695
rs6887695
0.010 GeneticVariation BEFREE In Australian men (but not women), rs6887695 genotype differed between Hashimoto's disease and Graves' disease, with a minor allele frequency (MAF) of 14% and 41%, respectively (P=0·034). 21198744

2011

dbSNP: rs7178239
rs7178239
0.010 GeneticVariation BEFREE The allele C and genotype CC in rs7178239 of SELENOS showed different trend in GD and HT patients when compared with the control. 28499373

2017

dbSNP: rs8099917
rs8099917
0.010 GeneticVariation BEFREE Using the polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) method, single-nucleotide polymorphisms (SNPs) of IL28B rs8099917 (IL28 G/T) and IL29 rs30461 (IL29 T/C) were studied in 99 patients with HT and 100 healthy controls. 27617784

2016

dbSNP: rs917997
rs917997
0.010 GeneticVariation BEFREE And in another SNP rs917997, AA+AG genotype presented an increased frequency in HT subjects compared with controls (P = 0.046, OR = 1.53). 26566691

2016

dbSNP: rs2234767
rs2234767
0.010 GeneticVariation BEFREE Association of the blood serum cytokines' rate and lymphocytes' apoptosis with polymorphic variants of the BCL-2 (rs17759659), CTLA-4 (rs231775) and APO-1÷FAS (rs2234767) genes in patients with nodular goiters in autoimmune thyroiditis and thyroid adenoma. 29250672

2017

dbSNP: rs2292779
rs2292779
0.010 GeneticVariation BEFREE We genotyped AGO1 rs636832A/G, AGO2 rs7005286C/T, AGO2 rs11166985A/G and AGO2 rs2292779C/G polymorphisms in 184 Graves' disease (GD) patients, 195 Hashimoto's disease (HD) patients and 122 healthy volunteers using the polymerase chain reaction-restriction fragment length polymorphism method. 29256262

2018

dbSNP: rs121434257
rs121434257
0.010 GeneticVariation BEFREE The G228W closely cosegregated with hypothyroid autoimmune thyroiditis in our family, whereas a low penetrance of the full autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy phenotype was observed. 11600535

2001

dbSNP: rs6479778
rs6479778
0.010 GeneticVariation BEFREE Fine mapping of the AITD locus, 10q, showed replicated association of the AITD phenotype (both GD and HT) with SNP rs6479778. 23118423

2013

dbSNP: rs10774625
rs10774625
0.010 GeneticVariation BEFREE Three genetic variants showed nominal association with HT; rs10774625 in ATXN2 gene (p = 0.0149, OR = 0.73, CI = 0.56-0.94), rs7171171 near RASGRP1 gene (p = 0.0356, OR = 1.4, CI = 1.02-1.92) and rs11675434 in TPO gene (p = 0.041, OR = 1.31, CI = 1.01-1.69). 27268232

2016

dbSNP: rs72928038
rs72928038
A 0.700 GeneticVariation GWASCAT Seven newly identified loci for autoimmune thyroid disease. 22922229

2012

dbSNP: rs3733197
rs3733197
0.010 GeneticVariation BEFREE Also SNP rs3733197 A allele showed a significant association in HT patients when compared with controls (P=0.031, OR=0.73 and 95% CI=0.55-0.97). 24127308

2013

dbSNP: rs17759659
rs17759659
0.010 GeneticVariation BEFREE Association of the blood serum cytokines' rate and lymphocytes' apoptosis with polymorphic variants of the BCL-2 (rs17759659), CTLA-4 (rs231775) and APO-1÷FAS (rs2234767) genes in patients with nodular goiters in autoimmune thyroiditis and thyroid adenoma. 29250672

2017

dbSNP: rs13277113
rs13277113
BLK
0.010 GeneticVariation BEFREE Our results showed reduced percentages of the G allele of rs13277113 of BLK in GD (P = 0.037, odds ratio [OR] = 0.78, 95% confidence interval [CI] = 0.62-0.99) and HT (P = 0.002, OR = 0.54, 95% CI = 0.36-0.81), compared to the controls. 30589937

2019

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE BRAF(V600E) mutation is associated with a more advanced PTC at diagnosis; however, its role in the clinicopathological characteristics of PTC with concurrent HT is unknown. 23469895

2013

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE Association between BRAF V600E Mutation and Ultrasound Features in Papillary Thyroid Carcinoma Patients with and without Hashimoto's Thyroiditis. 28687736

2017