Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1217691063
rs1217691063
0.100 GeneticVariation BEFREE 5,10-methylenetetrahydrofolate reductase (MTHFR) variants, C677T and A1298C, have been reported to be associated with decreased risk of acute lymphoblastic leukemia (ALL). 22943282

2012

dbSNP: rs397507444
rs397507444
0.100 GeneticVariation BEFREE 5,10-methylenetetrahydrofolate reductase (MTHFR) variants, C677T and A1298C, have been reported to be associated with decreased risk of acute lymphoblastic leukemia (ALL). 22943282

2012

dbSNP: rs1695
rs1695
0.020 GeneticVariation BEFREE A combination between GSTM1 double-null genotype and rs1695 also showed an association with ALL (P=0.042). 27299594

2016

dbSNP: rs569954362
rs569954362
0.010 GeneticVariation BEFREE A high-abundance C/T696 polymorphism was detected with nearly identical frequencies for both alleles, and a heterozygous C/A1242 sequence variant was identified in two ALL specimens. 11705857

2001

dbSNP: rs57725551
rs57725551
0.010 GeneticVariation BEFREE A high-abundance C/T696 polymorphism was detected with nearly identical frequencies for both alleles, and a heterozygous C/A1242 sequence variant was identified in two ALL specimens. 11705857

2001

dbSNP: rs1217691063
rs1217691063
0.100 GeneticVariation BEFREE A meta-analysis of case-control studies that investigated the association between the C677T and/or A1298C polymorphisms in the methylenetetrahydrofolate reductase (MTHFR) gene and acute lymphoblastic leukemia (ALL) was carried out. 16897583

2006

dbSNP: rs397507444
rs397507444
0.100 GeneticVariation BEFREE A meta-analysis of case-control studies that investigated the association between the C677T and/or A1298C polymorphisms in the methylenetetrahydrofolate reductase (MTHFR) gene and acute lymphoblastic leukemia (ALL) was carried out. 16897583

2006

dbSNP: rs138047632
rs138047632
0.010 GeneticVariation BEFREE A missense mutation affecting the 11th transmembrane domain of RFC (c.1250T>C; p.I417T) was found in one case of ALL at diagnosis. 18028428

2008

dbSNP: rs7088318
rs7088318
0.020 GeneticVariation BEFREE A novel ALL susceptibility locus at 10p12.31-12.2 (BMI1-PIP4K2A, rs7088318, P = 1.1 × 10(-11)) was identified in the genome-wide association study, with independent replication in European Americans, African Americans, and Hispanic Americans (P = .001, .009, and .04, respectively). 23512250

2013

dbSNP: rs1800460
rs1800460
0.020 GeneticVariation BEFREE A patient, exhibiting neutropenia on 6-MP was observed to be G460A-homozygote, while, two Acute Lymphoblastic Leukemia (ALL) patients with side-effects exhibited wild-type alleles. 20037211

2009

dbSNP: rs1217691063
rs1217691063
0.100 GeneticVariation BEFREE Accumulated evidence has demonstrated that C677T and A1298C polymorphisms of the MTHFR gene are associated with acute lymphoblastic leukemia (ALL) risk, but the results have been inconclusive. 21702646

2011

dbSNP: rs11545078
rs11545078
GGH
0.020 GeneticVariation BEFREE Allelic frequency of GGH 452C→T polymorphism was determined as 9.2% (CT, 11/71; TT, 1/71) in the ALL group, 8.0% (CT, 4/25; TT, 0/25) in the AML group, and 9.1% (TT, 4/132; T/C, 16/132) in the controls, respectively. 22568793

2012

dbSNP: rs6461639
rs6461639
0.010 GeneticVariation BEFREE Among them, rs6461639 (interaction P=1.88 × 10<sup>-5</sup> in the CAMP population) showed a significant association with the final BMD Z-scores in the ALL population (P=0.016). 26856247

2017

dbSNP: rs1057519743
rs1057519743
0.010 GeneticVariation BEFREE As controversy exists regarding the prognostic significance of genomic rearrangements of CRLF2 in pediatric B-precursor acute lymphoblastic leukemia (ALL) classified as standard/intermediate-risk (SR) or high-risk (HR), we assessed the prognostic significance of CRLF2 mRNA expression, CRLF2 genomic lesions (IGH@-CRLF2, P2RY8-CRLF2, CRLF2 F232C), deletion/mutation in genes frequently associated with high CRLF2 expression (IKZF1, JAK, IL7R), and minimal residual disease (MRD) in 1061 pediatric ALL patients (499 HR and 562 SR) on COG Trials P9905/P9906. 22368272

2012

dbSNP: rs7039798
rs7039798
0.010 GeneticVariation BEFREE Association analysis revealed 3 of 6 SNPs to confer significant increase in ALL risk these being rs7039798 (p= 0.014, OR=2.14), rs1544105 (p=0.010, OR= 2.24), and rs10106 (p=0.026, OR= 1.99). 26107232

2015

dbSNP: rs2735383
rs2735383
0.010 GeneticVariation BEFREE Besides, there is no report about the association between NBS1 3'UTR variant rs2735383 and ALL risk. 21166880

2011

dbSNP: rs3733890
rs3733890
0.010 GeneticVariation BEFREE BHMT (rs3733890) polymorphism showed no association with ALL. 28582843

2017

dbSNP: rs924607
rs924607
0.020 GeneticVariation BEFREE Bioinformatics tools and the implementation of artificial i Lack of association of the CEP72 rs924607 TT genotype with intelligence are expected to open the door wide for personalized medicine in the clinical practice of childhood ALL. 30832275

2019

dbSNP: rs368939818
rs368939818
0.010 GeneticVariation BEFREE Children with ALL (n = 96) were screened for GCPII C1561T, RFC1 G80A, cSHMT C1420T, TYMS 5´-UTR 2R3R, TYMS 3´-UTR ins6/del6, MTHFR C677T, MTR A2756G polymorphisms using PCR-RFLP and PCR-amplified fragment length polymorphism techniques. 22838948

2012

dbSNP: rs755001634
rs755001634
0.010 GeneticVariation BEFREE Children with ALL (n = 96) were screened for GCPII C1561T, RFC1 G80A, cSHMT C1420T, TYMS 5´-UTR 2R3R, TYMS 3´-UTR ins6/del6, MTHFR C677T, MTR A2756G polymorphisms using PCR-RFLP and PCR-amplified fragment length polymorphism techniques. 22838948

2012

dbSNP: rs757891309
rs757891309
MTR
0.010 GeneticVariation BEFREE Children with ALL (n = 96) were screened for GCPII C1561T, RFC1 G80A, cSHMT C1420T, TYMS 5´-UTR 2R3R, TYMS 3´-UTR ins6/del6, MTHFR C677T, MTR A2756G polymorphisms using PCR-RFLP and PCR-amplified fragment length polymorphism techniques. 22838948

2012

dbSNP: rs1039659576
rs1039659576
MTR
0.020 GeneticVariation BEFREE Children with ALL (n = 96) were screened for GCPII C1561T, RFC1 G80A, cSHMT C1420T, TYMS 5´-UTR 2R3R, TYMS 3´-UTR ins6/del6, MTHFR C677T, MTR A2756G polymorphisms using PCR-RFLP and PCR-amplified fragment length polymorphism techniques. 22838948

2012

dbSNP: rs1448674651
rs1448674651
0.020 GeneticVariation BEFREE Children with ALL (n = 96) were screened for GCPII C1561T, RFC1 G80A, cSHMT C1420T, TYMS 5´-UTR 2R3R, TYMS 3´-UTR ins6/del6, MTHFR C677T, MTR A2756G polymorphisms using PCR-RFLP and PCR-amplified fragment length polymorphism techniques. 22838948

2012

dbSNP: rs1979277
rs1979277
0.030 GeneticVariation BEFREE Children with ALL (n = 96) were screened for GCPII C1561T, RFC1 G80A, cSHMT C1420T, TYMS 5´-UTR 2R3R, TYMS 3´-UTR ins6/del6, MTHFR C677T, MTR A2756G polymorphisms using PCR-RFLP and PCR-amplified fragment length polymorphism techniques. 22838948

2012

dbSNP: rs201765376
rs201765376
MTR
0.020 GeneticVariation BEFREE Children with ALL (n = 96) were screened for GCPII C1561T, RFC1 G80A, cSHMT C1420T, TYMS 5´-UTR 2R3R, TYMS 3´-UTR ins6/del6, MTHFR C677T, MTR A2756G polymorphisms using PCR-RFLP and PCR-amplified fragment length polymorphism techniques. 22838948

2012