Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1010553
rs1010553
0.010 GeneticVariation BEFREE Six obesity-associated SNPs significantly departed from additive to dominant (N = 5) or recessive (N = 1) models, and a significant interaction was found between rs274609 (TNNI3K) and rs1010553 (ITIH4) on childhood obesity risk. 29769702

2019

dbSNP: rs1996023
rs1996023
0.010 GeneticVariation BEFREE Interestingly, the novel SNP rs1996023 is located at protein coding gene GNPDA2 (ccFDR = 1.28E-02), which has been reported to influence the risk of T2D and CO through central nervous system. 30816286

2019

dbSNP: rs274609
rs274609
0.010 GeneticVariation BEFREE Six obesity-associated SNPs significantly departed from additive to dominant (N = 5) or recessive (N = 1) models, and a significant interaction was found between rs274609 (TNNI3K) and rs1010553 (ITIH4) on childhood obesity risk. 29769702

2019

dbSNP: rs2943650
rs2943650
0.010 GeneticVariation BEFREE We found that IRS1 rs2943650 was significantly associated with BMI and risk of childhood obesity. 31248719

2019

dbSNP: rs8057044
rs8057044
FTO
0.010 GeneticVariation BEFREE Distribution of FTO single nutleotide polymorphisms (SNPs) rs1421085T>C, rs9939609T>A, rs8057044G>A and copy number variation (CNV) was evaluated in association with childhood obesity or overweight status in children with Mayan ethnicity. 30537186

2019

dbSNP: rs1256046734
rs1256046734
0.010 GeneticVariation BEFREE The present study evaluates the relationship between leptin G2548A (rs7799039) and leptin receptors (Gln223Arg (rs1137101) genotyping and its leptin level and the risk of childhood obesity. 29412799

2018

dbSNP: rs641738
rs641738
0.010 GeneticVariation BEFREE We first demonstrated in childhood obesity the role of the MBOAT7 rs641738 variant on serum ALT and the combined effect of the MBOAT7, PNPLA3, and TM6SF2 variants on NAFLD risk. 29601441

2018

dbSNP: rs7799039
rs7799039
0.010 GeneticVariation BEFREE The present study evaluates the relationship between leptin G2548A (rs7799039) and leptin receptors (Gln223Arg (rs1137101) genotyping and its leptin level and the risk of childhood obesity. 29412799

2018

dbSNP: rs12500837
rs12500837
NMU
0.010 GeneticVariation BEFREE From a large European multi-center study on childhood obesity, 4,528 children (2.0-9.9 years, mean age 6.0±1.8 SD; boys 52.2%) were randomly selected, stratifying by age, sex and country, and genotyped for tag single nucleotide polymorphisms (SNPs; rs6827359, T:C; rs12500837, T:C; rs9999653,C:T) of NMU gene, then haplotypes were inferred. 28235053

2017

dbSNP: rs1558902
rs1558902
FTO
0.010 GeneticVariation BEFREE After correction for multiple comparisons, six of these SNPs were robustly associated with childhood obesity: <i>FTO</i>-rs1558902 (<i>P</i>=5.6×10<sup>-5</sup>), <i>MC4R</i>-rs2331841 (<i>P</i>=4.4×10<sup>-4</sup>), <i>GNPDA2</i>-rs16858082 (<i>P</i> = 3.4×10<sup>-4</sup>), <i>PCSK1</i>-rs261967 (<i>P</i> = 0.001), <i>SEC16B</i>-rs516636 (<i>P</i> = 0.004) and <i>MAP2K5</i>-rs4776970 (<i>P</i> = 0.004), with odds ratios ranging from 1.211 to 1.421; while <i>ITIH4</i>-rs2535633 and <i>BDNF</i>-rs2030323 yielded nominal association with the same trait (<i>P</i> < 0.05). 29212175

2017

dbSNP: rs2030323
rs2030323
0.010 GeneticVariation BEFREE After correction for multiple comparisons, six of these SNPs were robustly associated with childhood obesity: <i>FTO</i>-rs1558902 (<i>P</i>=5.6×10<sup>-5</sup>), <i>MC4R</i>-rs2331841 (<i>P</i>=4.4×10<sup>-4</sup>), <i>GNPDA2</i>-rs16858082 (<i>P</i> = 3.4×10<sup>-4</sup>), <i>PCSK1</i>-rs261967 (<i>P</i> = 0.001), <i>SEC16B</i>-rs516636 (<i>P</i> = 0.004) and <i>MAP2K5</i>-rs4776970 (<i>P</i> = 0.004), with odds ratios ranging from 1.211 to 1.421; while <i>ITIH4</i>-rs2535633 and <i>BDNF</i>-rs2030323 yielded nominal association with the same trait (<i>P</i> < 0.05). 29212175

2017

dbSNP: rs2535633
rs2535633
0.010 GeneticVariation BEFREE After correction for multiple comparisons, six of these SNPs were robustly associated with childhood obesity: <i>FTO</i>-rs1558902 (<i>P</i>=5.6×10<sup>-5</sup>), <i>MC4R</i>-rs2331841 (<i>P</i>=4.4×10<sup>-4</sup>), <i>GNPDA2</i>-rs16858082 (<i>P</i> = 3.4×10<sup>-4</sup>), <i>PCSK1</i>-rs261967 (<i>P</i> = 0.001), <i>SEC16B</i>-rs516636 (<i>P</i> = 0.004) and <i>MAP2K5</i>-rs4776970 (<i>P</i> = 0.004), with odds ratios ranging from 1.211 to 1.421; while <i>ITIH4</i>-rs2535633 and <i>BDNF</i>-rs2030323 yielded nominal association with the same trait (<i>P</i> < 0.05). 29212175

2017

dbSNP: rs6234
rs6234
0.010 GeneticVariation BEFREE In addition to confirming rs6232 and rs6234 in <i>PCSK1</i> as polygenic risk variants for childhood obesity, we describe an association of rs725522 with insulin metabolism. 28271036

2017

dbSNP: rs6827359
rs6827359
NMU
0.010 GeneticVariation BEFREE From a large European multi-center study on childhood obesity, 4,528 children (2.0-9.9 years, mean age 6.0±1.8 SD; boys 52.2%) were randomly selected, stratifying by age, sex and country, and genotyped for tag single nucleotide polymorphisms (SNPs; rs6827359, T:C; rs12500837, T:C; rs9999653,C:T) of NMU gene, then haplotypes were inferred. 28235053

2017

dbSNP: rs9999653
rs9999653
NMU
0.010 GeneticVariation BEFREE From a large European multi-center study on childhood obesity, 4,528 children (2.0-9.9 years, mean age 6.0±1.8 SD; boys 52.2%) were randomly selected, stratifying by age, sex and country, and genotyped for tag single nucleotide polymorphisms (SNPs; rs6827359, T:C; rs12500837, T:C; rs9999653,C:T) of NMU gene, then haplotypes were inferred. 28235053

2017

dbSNP: rs1416580204
rs1416580204
MOK
0.010 GeneticVariation BEFREE The effects of Advanced Glycation End Products (RAGE)-374T/A and Gly82Ser variants and soluble-RAGE levels to obesity in children. 27188863

2016

dbSNP: rs2070600
rs2070600
0.010 GeneticVariation BEFREE The effects of Advanced Glycation End Products (RAGE)-374T/A and Gly82Ser variants and soluble-RAGE levels to obesity in children. 27188863

2016

dbSNP: rs3746619
rs3746619
0.010 GeneticVariation BEFREE We observed high population differentiation between European and African populations at two MC3R childhood obesity- and insulin resistance-associated single-nucleotide polymorphisms (rs3746619 and rs3827103) using Wright's F statistics. 26909893

2016

dbSNP: rs3827103
rs3827103
0.010 GeneticVariation BEFREE We observed high population differentiation between European and African populations at two MC3R childhood obesity- and insulin resistance-associated single-nucleotide polymorphisms (rs3746619 and rs3827103) using Wright's F statistics. 26909893

2016

dbSNP: rs1319501
rs1319501
0.010 GeneticVariation BEFREE We investigated the effects of traditional metabolic risk factors (MRFs) and NAMPT polymorphisms T/C (rs1319501) and A/G (rs3801266) or haplotypes on visfatin/NAMPT levels in obese children and adolescents, and whether NAMPT polymorphisms and/or haplotypes are associated with susceptibility to childhood obesity. 24100423

2015

dbSNP: rs2273773
rs2273773
0.010 GeneticVariation BEFREE The aim of this study was to investigate the association between childhood obesity and SIRT1 gene polymorphisms regarding rs7895833 A > G in the promoter region, rs7069102 C > G in intron 4, and rs2273773 C > T in exon 5 using PCR-CTPP method in 120 obese and 120 normal weight children. 25233986

2015

dbSNP: rs2501432
rs2501432
0.010 GeneticVariation BEFREE The Cannabinoid Receptor 2 Q63R Variant Modulates the Relationship between Childhood Obesity and Age at Menarche. 26447698

2015

dbSNP: rs35761398
rs35761398
0.010 GeneticVariation BEFREE The Cannabinoid Receptor 2 Q63R Variant Modulates the Relationship between Childhood Obesity and Age at Menarche. 26447698

2015

dbSNP: rs3801266
rs3801266
0.010 GeneticVariation BEFREE We investigated the effects of traditional metabolic risk factors (MRFs) and NAMPT polymorphisms T/C (rs1319501) and A/G (rs3801266) or haplotypes on visfatin/NAMPT levels in obese children and adolescents, and whether NAMPT polymorphisms and/or haplotypes are associated with susceptibility to childhood obesity. 24100423

2015

dbSNP: rs3918188
rs3918188
0.010 GeneticVariation BEFREE However, no study has tested the hypothesis that NOS3 tagSNPs rs3918226, rs3918188, rs743506 and rs7830 affect nitrite levels and are associated with hypertension in childhood obesity. 24943287

2015