Disease: Tuberculosis
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10065172
IRGM
0.790 0.200 5 150848436 synonymous variant C/T snv 0.17 0.21 8
rs1024611 0.568 0.800 17 34252769 upstream gene variant A/G snv 0.28 63
rs1045642
ABCB1
0.456 0.840 7 87509329 synonymous variant A/G;T snv 0.50 214
rs10754558
NLRP3
0.695 0.480 1 247448734 3 prime UTR variant G/C;T snv 20
rs1128503
ABCB1
0.564 0.760 7 87550285 synonymous variant A/G snv 0.54 0.63 64
rs12212067
FOXO3
0.716 0.320 6 108659993 intron variant T/G snv 0.14 20
rs13361189 0.752 0.240 5 150843825 upstream gene variant T/C snv 0.21 13
rs17235409
SLC11A1
0.653 0.600 2 218395009 missense variant G/A;C snv 4.9E-02; 4.1E-06 31
rs17525495
LTA4H
0.882 0.080 12 96035599 5 prime UTR variant G/A snv 9.9E-02 4
rs1799724
LTA ; TNF
0.600 0.680 6 31574705 upstream gene variant C/T snv 8.5E-02 47
rs1799964
LTA ; LOC100287329 ; TNF
0.608 0.760 6 31574531 upstream gene variant T/C snv 0.19 47
rs1800629
TNF
0.472 0.920 6 31575254 upstream gene variant G/A snv 0.12 0.14 169
rs1800871
IL19 ; IL10
0.508 0.800 1 206773289 5 prime UTR variant A/G snv 0.69 108
rs1800896
IL19 ; IL10
0.507 0.800 1 206773552 intron variant T/C snv 0.41 113
rs1816702
TLR2
0.827 0.120 4 153688371 non coding transcript exon variant T/C snv 0.79 6
rs1861494
IFNG-AS1 ; IFNG
0.716 0.400 12 68157629 intron variant C/T snv 0.75 15
rs187238
IL18
0.602 0.680 11 112164265 intron variant C/A;G snv 48
rs1946518
IL18
0.602 0.760 11 112164735 intron variant T/G snv 0.60 46
rs2032582
ABCB1
0.538 0.800 7 87531302 missense variant A/C;T snv 0.54; 3.8E-02 97
rs2066844
NOD2
0.587 0.520 16 50712015 missense variant C/T snv 2.6E-02 2.9E-02 54
rs2066845
NOD2
0.611 0.600 16 50722629 missense variant G/C;T snv 1.1E-02; 2.2E-04 46
rs2234711
IFNGR1
0.827 0.080 6 137219383 5 prime UTR variant A/G snv 0.43 6
rs2275913
IL17A
0.514 0.760 6 52186235 upstream gene variant G/A snv 0.28 105
rs2430561
IFNG ; IFNG-AS1
0.590 0.760 12 68158742 intron variant T/A snv 0.36 50
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 121