Disease: Tuberculosis
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1045642
ABCB1
0.456 0.840 7 87509329 synonymous variant A/G;T snv 0.50 214
rs10754558
NLRP3
0.695 0.480 1 247448734 3 prime UTR variant G/C;T snv 20
rs17235409
SLC11A1
0.653 0.600 2 218395009 missense variant G/A;C snv 4.9E-02; 4.1E-06 31
rs187238
IL18
0.602 0.680 11 112164265 intron variant C/A;G snv 48
rs2032582
ABCB1
0.538 0.800 7 87531302 missense variant A/C;T snv 0.54; 3.8E-02 97
rs2066845
NOD2
0.611 0.600 16 50722629 missense variant G/C;T snv 1.1E-02; 2.2E-04 46
rs3751143
P2RX7 ; LOC105370032
0.742 0.480 12 121184501 missense variant A/C;G snv 0.19; 4.0E-06 12
rs4986790
TLR4
0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06 223
rs72553867
IRGM
0.925 0.080 5 150848404 missense variant C/A;T snv 4.9E-02 2
rs754342091
TLR4
0.790 0.200 9 117712421 missense variant A/G snv 3.2E-05 1.4E-05 7
rs5743278
NOD2
0.882 0.080 16 50712085 missense variant C/G snv 3.2E-03 1.3E-02 3
rs5743708
TLR2
0.525 0.800 4 153705165 missense variant G/A snv 1.7E-02 1.8E-02 98
rs2066844
NOD2
0.587 0.520 16 50712015 missense variant C/T snv 2.6E-02 2.9E-02 54
rs4986791
TLR4
0.456 0.840 9 117713324 missense variant C/T snv 5.7E-02 4.9E-02 182
rs5030737
MBL2
0.752 0.360 10 52771482 missense variant G/A snv 5.6E-02 5.0E-02 11
rs763780
IL17F
0.531 0.720 6 52236941 missense variant T/C snv 6.7E-02 6.6E-02 87
rs1799724
LTA ; TNF
0.600 0.680 6 31574705 upstream gene variant C/T snv 8.5E-02 47
rs17525495
LTA4H
0.882 0.080 12 96035599 5 prime UTR variant G/A snv 9.9E-02 4
rs12212067
FOXO3
0.716 0.320 6 108659993 intron variant T/G snv 0.14 20
rs1800629
TNF
0.472 0.920 6 31575254 upstream gene variant G/A snv 0.12 0.14 169
rs1799964
LTA ; LOC100287329 ; TNF
0.608 0.760 6 31574531 upstream gene variant T/C snv 0.19 47
rs13361189 0.752 0.240 5 150843825 upstream gene variant T/C snv 0.21 13
rs4958843
IRGM
0.925 0.080 5 150845362 upstream gene variant T/C snv 0.21 2
rs10065172
IRGM
0.790 0.200 5 150848436 synonymous variant C/T snv 0.17 0.21 8
rs4804803
CD209
0.732 0.360 19 7747847 upstream gene variant A/G snv 0.26 15