Disease: Metabolic Syndrome X
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1558902
FTO
0.827 0.120 16 53769662 intron variant T/A snv 0.31 21
rs2144908
LOC105372629 ; HNF4A
0.851 0.120 20 44357077 intron variant G/A snv 0.18 5
rs2267443
SREBF2
0.882 0.120 22 41891450 intron variant A/G snv 0.67 5
rs2291725
GIP
0.882 0.120 17 48961770 missense variant T/C snv 0.50 0.40 4
rs2293855
MTMR9
0.851 0.120 8 11319901 non coding transcript exon variant G/A snv 0.35 5
rs3213445
CHKB-CPT1B ; CPT1B
0.851 0.120 22 50577409 missense variant T/C snv 0.12 8.9E-02 4
rs3732581
PARL
0.790 0.120 3 183840614 missense variant C/G;T snv 0.46; 1.2E-05 9
rs4641
LMNA
0.851 0.120 1 156137743 splice region variant C/T snv 0.26 0.21 6
rs4757268
PDE3B
0.827 0.120 11 14789216 synonymous variant A/G snv 0.63 0.64 6
rs5015480 0.851 0.120 10 92705802 downstream gene variant C/T snv 0.42 9
rs560887
SPC25 ; G6PC2
0.827 0.120 2 168906638 intron variant T/C snv 0.79 0.80 18
rs7202116
FTO
0.882 0.120 16 53787703 intron variant A/G snv 0.41 7
rs726344
FNDC5
0.882 0.120 1 32867503 intron variant G/A snv 0.16 3
rs925946
BDNF-AS
0.882 0.120 11 27645655 intron variant T/G snv 0.72 9
rs9465871
CDKAL1
0.882 0.120 6 20717024 intron variant T/C snv 0.30 4
rs9940128
FTO
0.851 0.120 16 53766842 intron variant G/A snv 0.42 10
rs10830962 0.851 0.160 11 92965261 upstream gene variant C/A;G;T snv 7
rs116843064
ANGPTL4
0.776 0.160 19 8364439 missense variant G/A snv 1.3E-02 1.5E-02 16
rs121909244
PPARG
0.776 0.160 3 12434111 missense variant C/A;T snv 4.0E-06 11
rs12221497
NR1H3
0.882 0.160 11 47259102 splice region variant G/A snv 0.11 4
rs1337503417
KRT16
0.790 0.160 17 41612325 missense variant G/T snv 4.0E-06 12
rs1411766
LOC101927627
0.882 0.160 13 109599813 intron variant G/A;T snv 3
rs146052672
HMGA1
0.851 0.160 6 34242693 intron variant -/C delins 5
rs163182
KCNQ1
0.882 0.160 11 2822986 intron variant G/A;C snv 3
rs17373080
NR1H2
0.851 0.160 19 50376267 5 prime UTR variant C/G snv 0.29 4