Disease: Metabolic Syndrome X
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs121912706
ANK2
0.851 0.200 4 113373306 missense variant C/T snv 1.0E-03 9.2E-04 5
rs12221497
NR1H3
0.882 0.160 11 47259102 splice region variant G/A snv 0.11 4
rs12255372
TCF7L2
0.667 0.480 10 113049143 intron variant G/A;T snv 28
rs1232898090
PPARA
0.637 0.600 22 46198429 missense variant G/C;T snv 4.0E-06; 4.0E-06 40
rs1260326
GCKR
0.645 0.600 2 27508073 missense variant T/C;G snv 0.63; 4.0E-06 0.68 81
rs1267969615
ACE
0.532 0.760 17 63490960 missense variant T/C snv 4.0E-06 100
rs12691
CEBPA
0.925 0.080 19 33300221 3 prime UTR variant G/A snv 0.16 2
rs13266634
SLC30A8 ; LOC105375716
0.724 0.480 8 117172544 missense variant C/A;T snv 0.29 23
rs13283456
PTGES2
0.925 0.080 9 128122474 missense variant C/A;T snv 4.0E-06; 0.13 3
rs1333049
CDKN2B-AS1
0.614 0.520 9 22125504 intron variant G/C snv 0.41 60
rs1337503417
KRT16
0.790 0.160 17 41612325 missense variant G/T snv 4.0E-06 12
rs137853240
HNF1A
0.807 0.080 12 120994405 missense variant G/A snv 1.4E-05 8
rs1387153 0.807 0.200 11 92940662 downstream gene variant C/G;T snv 10
rs1411766
LOC101927627
0.882 0.160 13 109599813 intron variant G/A;T snv 3
rs1421085
FTO
0.752 0.280 16 53767042 intron variant T/C snv 0.31 28
rs1423096 0.925 0.080 19 7674291 upstream gene variant T/C snv 0.92 3
rs146052672
HMGA1
0.851 0.160 6 34242693 intron variant -/C delins 5
rs1501299
ADIPOQ ; ADIPOQ-AS1
0.597 0.720 3 186853334 intron variant G/C;T snv 52
rs1544410
VDR
0.542 0.760 12 47846052 intron variant C/A;G;T snv 78
rs1558902
FTO
0.827 0.120 16 53769662 intron variant T/A snv 0.31 21
rs16139
NPY ; LOC107986777
0.658 0.560 7 24285260 missense variant T/A;C snv 4.0E-06; 3.0E-02 36
rs16147
LOC107986777 ; NPY
0.695 0.400 7 24283791 upstream gene variant T/C snv 0.48 18
rs163182
KCNQ1
0.882 0.160 11 2822986 intron variant G/A;C snv 3
rs17300539
ADIPOQ
0.752 0.320 3 186841671 upstream gene variant G/A snv 5.3E-02 11
rs17368528
H6PD
0.827 0.400 1 9264154 missense variant C/A;T snv 0.12 8.9E-02 5