Disease: Metabolic Syndrome X
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1558902
FTO
0.827 0.120 16 53769662 intron variant T/A snv 0.31 21
rs16147
LOC107986777 ; NPY
0.695 0.400 7 24283791 upstream gene variant T/C snv 0.48 18
rs163182
KCNQ1
0.882 0.160 11 2822986 intron variant G/A;C snv 3
rs17300539
ADIPOQ
0.752 0.320 3 186841671 upstream gene variant G/A snv 5.3E-02 11
rs17373080
NR1H2
0.851 0.160 19 50376267 5 prime UTR variant C/G snv 0.29 4
rs17782313 0.683 0.480 18 60183864 intergenic variant T/C snv 0.24 34
rs1799941
SHBG
0.763 0.280 17 7630105 5 prime UTR variant G/A snv 0.18 11
rs1800592 0.807 0.200 4 140572807 upstream gene variant T/C snv 0.40 8
rs1800610
TNF
0.807 0.320 6 31576050 intron variant G/A snv 8.4E-02 7
rs1800624
PBX2 ; AGER
0.658 0.480 6 32184610 upstream gene variant A/G;T snv 33
rs1800625
AGER ; PBX2
0.641 0.680 6 32184665 upstream gene variant A/G snv 0.15 39
rs1800796
IL6-AS1 ; STEAP1B ; IL6
0.555 0.760 7 22726627 non coding transcript exon variant G/C snv 9.9E-02 74
rs1800797
IL6 ; IL6-AS1 ; STEAP1B
0.605 0.800 7 22726602 non coding transcript exon variant A/G snv 0.72 43
rs1801260
CLOCK ; TMEM165
0.695 0.280 4 55435202 3 prime UTR variant A/G snv 0.25 28
rs1805192
PPARG
0.510 0.840 3 12379739 missense variant C/G snv 121
rs1862513
RETN
0.763 0.360 19 7668907 upstream gene variant C/G;T snv 11
rs1884051
ESR1
0.882 0.080 6 151962144 intron variant G/A snv 0.60 4
rs1884613
LOC105372629
0.807 0.200 20 44351775 intron variant C/A;G;T snv 7
rs1884614
LOC105372629
0.882 0.080 20 44351879 non coding transcript exon variant C/T snv 0.18 5
rs2010963
VEGFA
0.542 0.840 6 43770613 5 prime UTR variant C/G snv 0.68 82
rs2074356
HECTD4
0.763 0.280 12 112207597 intron variant G/A snv 3.8E-03 18
rs2075290
ZPR1
0.882 0.160 11 116782580 intron variant C/G;T snv 10
rs2144908
LOC105372629 ; HNF4A
0.851 0.120 20 44357077 intron variant G/A snv 0.18 5
rs2236242
SERPINA12
0.776 0.280 14 94493715 intron variant T/A snv 0.31 9
rs2237895
KCNQ1
0.790 0.240 11 2835964 intron variant A/C;T snv 10