DisGeNET - a database of gene-disease associations

List of shared variants

Malignant neoplasm of ovary, C1140680

Disease: Malignant neoplasm of breast

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs273900729	BRCA1	0.925	0.160	17	43082529	missense variant	A/G	snv			2
rs41293521	BRCA2	0.925	0.160	13	32394724	missense variant	T/C	snv	2.9E-04	2.5E-04	2
rs372038369	RAD51D ; RAD51L3-RFFL	0.882	0.160	17	35101233	missense variant	G/A;T	snv	1.2E-05	1.4E-05	3
rs587780128	XRCC2	0.882	0.160	7	152649010	missense variant	G/A	snv	1.2E-05	3.5E-05	3
rs61755649	RAD51B	0.882	0.160	14	67885891	missense variant	C/T	snv	6.8E-05	4.9E-05	3
rs80359078	BRCA2	0.882	0.160	13	32370430	missense variant	G/A	snv	3.2E-05	2.1E-05	3
rs869312774	PALB2	0.925	0.160	16	23614019	frameshift variant	T/-	delins			3
rs4987046	BRCA2	0.925	0.160	13	32319134	missense variant	A/G	snv	1.6E-03	1.6E-03	4
rs1800751	BRCA1	0.851	0.160	17	43047676	missense variant	G/A;C	snv	4.0E-06		5
rs190900046	BRCA1	0.827	0.160	17	43104197	synonymous variant	A/C	snv	8.0E-06	4.2E-05	5
rs3177427	GSTZ1	0.827	0.160	14	77326864	stop gained	G/A;C;T	snv			5
rs638820	GSTM4 ; GSTM2	0.827	0.160	1	109667284	intron variant	G/A	snv		0.52	5
rs67397200		0.827	0.160	19	17290595	upstream gene variant	C/G	snv		0.27	5
rs750042441	PGR ; PGR-AS1	0.827	0.160	11	101128367	missense variant	G/A;C	snv	6.1E-05; 4.3E-06		5
rs80356897	BRCA1	0.827	0.160	17	43099853	missense variant	A/G	snv			5
rs80357438	NBR2 ; BRCA1	0.851	0.200	17	43124032	stop gained	A/G;T	snv			5
rs80357474	BRCA1	0.827	0.200	17	43049188	missense variant	A/C;G;T	snv	8.0E-06		5
rs1800709	BRCA1	0.851	0.160	17	43093010	missense variant	G/A	snv	1.7E-03	1.4E-03	6
rs1836724	ERBB4	0.807	0.240	2	211380227	3 prime UTR variant	G/A	snv		0.57	6
rs63750695	PMS2	0.851	0.280	7	5978675	frameshift variant	AAGTT/-	delins			6
rs764918809	MDM2	0.827	0.160	12	68839337	missense variant	T/C	snv	4.0E-06		6
rs786203319	BRCA1	0.827	0.160	17	43115759	missense variant	G/A	snv			6
rs1467465	THEMIS2	0.827	0.160	1	27884892	non coding transcript exon variant	A/G	snv		0.61	7
rs1801200	ERBB2	0.790	0.200	17	39723335	missense variant	A/G;T	snv			7
rs6917	PHB	0.790	0.200	17	49404181	3 prime UTR variant	G/A	snv		0.16	7