DisGeNET - a database of gene-disease associations

List of shared variants

Liver carcinoma, C2239176

Disease: Secondary malignant neoplasm of lymph node

Source: BEFREE ×

Results per page

Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs653765	ADAM10	0.763	0.240	15	58749813	upstream gene variant	T/C;G	snv		0.45	10
rs12774070	ADAMTS14	0.925	0.120	10	70753879	missense variant	C/A;G	snv	0.23	0.19	4
rs61573157	ADAMTS14	0.882	0.160	10	70760503	missense variant	C/T	snv	8.6E-02	7.5E-02	6
rs2064863	AURKA	0.925	0.120	20	56387716	intron variant	T/A;C;G	snv			4
rs16893344	CCN4	0.807	0.160	8	133194036	intron variant	C/T	snv		0.29	6
rs187115	CD44	0.695	0.320	11	35154612	intron variant	T/C	snv		0.37	22
rs6691378	CHI3L1	0.882	0.160	1	203187994	upstream gene variant	G/A	snv		0.19	6
rs1051740	EPHX1	0.592	0.760	1	225831932	missense variant	T/C	snv	0.32	0.27	56
rs11615	ERCC1	0.572	0.640	19	45420395	synonymous variant	A/G	snv	0.50	0.55	62
rs6024836	FAM210B ; AURKA	0.851	0.160	20	56369012	downstream gene variant	G/A	snv		0.42	6
rs351855	FGFR4	0.597	0.560	5	177093242	missense variant	G/A	snv	0.33	0.26	55
rs9679162	GALNT14	0.882	0.120	2	31024648	intron variant	G/T	snv		0.48	4
rs1695	GSTP1	0.457	0.880	11	67585218	missense variant	A/G	snv	0.34	0.36	187
rs10053538	HAVCR2	0.807	0.160	5	157110499	intron variant	C/A;T	snv			7
rs1360485	HMGB1	0.742	0.320	13	30457747	3 prime UTR variant	C/T	snv		0.58	15
rs2249825	HMGB1	0.695	0.440	13	30463766	5 prime UTR variant	G/A;C;T	snv			22
rs920778	HOTAIR	0.633	0.480	12	53966448	intron variant	G/A	snv		0.57	36
rs20541	IL13 ; TH2LCRR	0.585	0.720	5	132660272	missense variant	A/G	snv	0.72	0.77	47
rs2275913	IL17A	0.514	0.760	6	52186235	upstream gene variant	G/A	snv		0.28	105
rs1800872	IL19 ; IL10	0.495	0.840	1	206773062	5 prime UTR variant	T/G	snv		0.69	118
rs1143633	IL1B	0.752	0.280	2	112832890	intron variant	C/G;T	snv			10
rs3917356	IL1B	0.882	0.160	2	112834786	intron variant	C/T	snv		0.39	4
rs10889677	IL23R	0.627	0.720	1	67259437	3 prime UTR variant	C/A	snv		0.27	40
rs2071559	KDR	0.667	0.680	4	55126199	upstream gene variant	A/G	snv		0.53	26
rs13181	KLC3 ; ERCC2	0.487	0.760	19	45351661	stop gained	T/A;G	snv	4.0E-06; 0.32		134