TNFSF13B, TNF superfamily member 13b, 10673

N. diseases: 282; N. variants: 13
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs12583006
rs12583006
Entrez Id: 10673
Gene Symbol: TNFSF13B
TNFSF13B
CUI: C0023895
Disease:
Liver diseases
0.010 GeneticVariation BEFREE This study examined BAFF rs9514828 and rs12583006 polymorphisms in 386 patients with various liver diseases related to chronic HBV infection, 69 HBV infection resolvers, and 191 healthy controls. 28627389 2017
dbSNP: rs9514828
rs9514828
Entrez Id: 10673
Gene Symbol: TNFSF13B
TNFSF13B
CUI: C0019158
Disease:
Hepatitis
0.010 GeneticVariation BEFREE These results suggest that the rs9514828 allele T may predispose to the liver inflammation in chronic HBV infection, and the rs9514828 and rs12583006 polymorphisms may combinatorially confer susceptibility to chronic HBV infection and resolution of the infection, possibly not through direct effect on serum BAFF levels. 28627389 2017
dbSNP: rs9514828
rs9514828
Entrez Id: 10673
Gene Symbol: TNFSF13B
TNFSF13B
CUI: C1623038
Disease:
Cirrhosis
0.010 GeneticVariation BEFREE The results showed that patients with chronic hepatitis had higher frequencies of rs9514828 genotype TT (19.75% vs. 11.86%, OR=2.397, 95% CI=1.121-5.125, P=0.023), genotypes CT+TT (74.69% vs. 63.55%, OR=1.478, 95% CI=1.050-2.080, P=0.045), and allele T (47.22% vs. 37.72%, OR=1.478, 95% CI=1.050-2.080, P=0.025) compared with patients with cirrhosis. 28627389 2017
dbSNP: rs9514828
rs9514828
Entrez Id: 10673
Gene Symbol: TNFSF13B
TNFSF13B
CUI: C0023895
Disease:
Liver diseases
0.010 GeneticVariation BEFREE This study examined BAFF rs9514828 and rs12583006 polymorphisms in 386 patients with various liver diseases related to chronic HBV infection, 69 HBV infection resolvers, and 191 healthy controls. 28627389 2017
dbSNP: rs9514828
rs9514828
Entrez Id: 10673
Gene Symbol: TNFSF13B
TNFSF13B
CUI: C0023890
Disease:
Liver Cirrhosis
0.010 GeneticVariation BEFREE The results showed that patients with chronic hepatitis had higher frequencies of rs9514828 genotype TT (19.75% vs. 11.86%, OR=2.397, 95% CI=1.121-5.125, P=0.023), genotypes CT+TT (74.69% vs. 63.55%, OR=1.478, 95% CI=1.050-2.080, P=0.045), and allele T (47.22% vs. 37.72%, OR=1.478, 95% CI=1.050-2.080, P=0.025) compared with patients with cirrhosis. 28627389 2017
dbSNP: rs1041569
rs1041569
Entrez Id: 10673
Gene Symbol: TNFSF13B
TNFSF13B
CUI: C0023434
Disease:
Chronic Lymphocytic Leukemia
0.010 GeneticVariation BEFREE Our results point to a possible association between the rs9514828 (CT vs. CC + TT; OR = 0.74; CI 95 % = 0.57; 0.97; p = 0.022) and rs1041569 (AT vs. AA + TT; OR = 0.72; CI 95 % = 0.54; 0.95; p = 0.021) of BAFF gene and rs61756766 (CC vs. CT; OR = 2.03; CI 95 % = 1.03; 3.99; p = 0.03) of BAFF-R gene and CLL risk. 27468724 2016
dbSNP: rs2893321
rs2893321
Entrez Id: 10673
Gene Symbol: TNFSF13B
TNFSF13B
CUI: C0018213
Disease:
Graves Disease
0.010 GeneticVariation BEFREE Associations of rs2893321 with susceptibility to GD and AITDs and the correlation between rs2893321 and TAb exhibit a dimorphic pattern. 27136204 2016
dbSNP: rs9514828
rs9514828
Entrez Id: 10673
Gene Symbol: TNFSF13B
TNFSF13B
CUI: C1868683
Disease:
B-CELL MALIGNANCY, LOW-GRADE
0.010 GeneticVariation BEFREE Although the obtained P-values for all 20 SNPs did not reach statistical significance for this study (α = 0.003), the high value of the global chi-squared statistic (χ(2) df = 38  = 52.65; P = 0.0586), and obtained values of odds ratio indicate that rs9514828 (BAFF), rs3803800 (APRIL) and rs4985726 (TACI) may be associated with the risk of B-CLL. 26268376 2015
dbSNP: rs12583006
rs12583006
Entrez Id: 10673
Gene Symbol: TNFSF13B
TNFSF13B
CUI: C0151449
Disease:
Primary Sjögren's syndrome
0.010 GeneticVariation BEFREE The low risk pSS group exhibited higher frequency of the minor A allele and AA genotype of the rs12583006 variant compared to HC. 23845207 2014
dbSNP: rs9514828
rs9514828
Entrez Id: 10673
Gene Symbol: TNFSF13B
TNFSF13B
CUI: C0151449
Disease:
Primary Sjögren's syndrome
0.010 GeneticVariation BEFREE The high risk pSS group was characterized by higher frequency of the minor T allele of the rs9514828 BAFF polymorphism compared to HC. 23845207 2014
dbSNP: rs9514828
rs9514828
Entrez Id: 10673
Gene Symbol: TNFSF13B
TNFSF13B
CUI: C3888909
Disease:
BAFF polymorphism
0.010 GeneticVariation BEFREE The high risk pSS group was characterized by higher frequency of the minor T allele of the rs9514828 BAFF polymorphism compared to HC. 23845207 2014
dbSNP: rs12428930
rs12428930
Entrez Id: 10673
Gene Symbol: TNFSF13B
TNFSF13B
CUI: C0867389
Disease:
Chronic graft-versus-host disease
0.010 GeneticVariation BEFREE In multivariate analyses, 4 recipient BAFF SNPs (rs16972217 [odds ratio = 2.72, P = .004], rs7993590 [odds ratio = 2.35, P = .011], rs12428930 [odds ratio2.53, P = .008], and rs2893321 [odds ratio = 2.48, P = .009]) were independent predictors of GVHD subtypes, adjusted for conventional predictors of cGVHD. 21628416 2011
dbSNP: rs16972217
rs16972217
Entrez Id: 10673
Gene Symbol: TNFSF13B
TNFSF13B
CUI: C0867389
Disease:
Chronic graft-versus-host disease
0.010 GeneticVariation BEFREE In multivariate analyses, 4 recipient BAFF SNPs (rs16972217 [odds ratio = 2.72, P = .004], rs7993590 [odds ratio = 2.35, P = .011], rs12428930 [odds ratio2.53, P = .008], and rs2893321 [odds ratio = 2.48, P = .009]) were independent predictors of GVHD subtypes, adjusted for conventional predictors of cGVHD. 21628416 2011
dbSNP: rs2893321
rs2893321
Entrez Id: 10673
Gene Symbol: TNFSF13B
TNFSF13B
CUI: C0867389
Disease:
Chronic graft-versus-host disease
0.010 GeneticVariation BEFREE In multivariate analyses, 4 recipient BAFF SNPs (rs16972217 [odds ratio = 2.72, P = .004], rs7993590 [odds ratio = 2.35, P = .011], rs12428930 [odds ratio2.53, P = .008], and rs2893321 [odds ratio = 2.48, P = .009]) were independent predictors of GVHD subtypes, adjusted for conventional predictors of cGVHD. 21628416 2011
dbSNP: rs7993590
rs7993590
Entrez Id: 10673
Gene Symbol: TNFSF13B
TNFSF13B
CUI: C0867389
Disease:
Chronic graft-versus-host disease
0.010 GeneticVariation BEFREE In multivariate analyses, 4 recipient BAFF SNPs (rs16972217 [odds ratio = 2.72, P = .004], rs7993590 [odds ratio = 2.35, P = .011], rs12428930 [odds ratio2.53, P = .008], and rs2893321 [odds ratio = 2.48, P = .009]) were independent predictors of GVHD subtypes, adjusted for conventional predictors of cGVHD. 21628416 2011
dbSNP: rs2582869
rs2582869
Entrez Id: 10673
Gene Symbol: TNFSF13B
TNFSF13B
CUI: C0024305
Disease:
Lymphoma, Non-Hodgkin
0.010 GeneticVariation BEFREE Accordingly, the single most significant SNPs associated with NHL were FAS rs4934436 (p-trend = 0.0024), IRF4 rs12211228 (p-trend = 0.0026), TNFSF13B rs2582869 (p-trend = 0.0055), TANK rs1921310 (p-trend = 0.0025), TNFSF7 rs16994592 (p-trend = 0.0024), and TNFRSF13C rs6002551 (p-trend = 0.0074). 19390683 2009