GRN, granulin precursor, 2896

N. diseases: 412; N. variants: 66
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs5848
rs5848
Entrez Id: 2896;284069
Gene Symbol: GRN;FAM171A2
GRN;FAM171A2
CUI: C0236788
Disease:
Bipolar II disorder
0.010 GeneticVariation BEFREE The presence of the polymorphic variant of the rs5848 single nucleotide polymorphism is protective for the development of bipolar I disorder (BD-I) (odds ratio = 0.55, 95% confidence interval: 0.33-0.93; p = 0.024) but not bipolar II disorder (BD-II) (p > 0.05). 24499389 2014
dbSNP: rs1372439127
rs1372439127
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0002395
Disease:
Alzheimer's Disease
0.010 GeneticVariation BEFREE The PSEN1, p.E318G variant increases the risk of Alzheimer's disease in APOE-ε4 carriers. 23990795 2013
dbSNP: rs1372439127
rs1372439127
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0234985
Disease:
Mental deterioration
0.010 GeneticVariation BEFREE Additionally, we found that in the presence of at least one APOE-ε4 allele, p.E318G is associated with more Aβ plaques and faster cognitive decline. 23990795 2013
dbSNP: rs1372439127
rs1372439127
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0338656
Disease:
Impaired cognition
0.010 GeneticVariation BEFREE Additionally, we found that in the presence of at least one APOE-ε4 allele, p.E318G is associated with more Aβ plaques and faster cognitive decline. 23990795 2013
dbSNP: rs373885474
rs373885474
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0011265
Disease:
Presenile dementia
0.010 GeneticVariation BEFREE Hereby, we describe a patient affected by semantic variant of primary progressive aphasia (svPPA) with a highly positive family history of dementia, carrying a novel GRN missense variation in exon 11 [g.2897 C > T (p.Thr409Met)], predicted in silico to be damaging to protein structure and function. 23624518 2013
dbSNP: rs373885474
rs373885474
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0497327
Disease:
Dementia
0.010 GeneticVariation BEFREE Hereby, we describe a patient affected by semantic variant of primary progressive aphasia (svPPA) with a highly positive family history of dementia, carrying a novel GRN missense variation in exon 11 [g.2897 C > T (p.Thr409Met)], predicted in silico to be damaging to protein structure and function. 23624518 2013
dbSNP: rs5848
rs5848
Entrez Id: 2896;284069
Gene Symbol: GRN;FAM171A2
GRN;FAM171A2
CUI: C0497327
Disease:
Dementia
0.010 GeneticVariation BEFREE This is consistent with the finding that miR-659 binding to the high risk T allele of rs5848 may augment translational inhibition of GRN and alter risk of FTD and possibly other dementias. 21047645 2011
dbSNP: rs5848
rs5848
Entrez Id: 2896;284069
Gene Symbol: GRN;FAM171A2
GRN;FAM171A2
CUI: C0011265
Disease:
Presenile dementia
0.010 GeneticVariation BEFREE It has recently been shown that homozygous carriers of the T allele of rs5848 have an elevated risk of developing FTD, and this polymorphism may play a role in the pathogenesis of other dementia by modifying progranulin level. 21047645 2011
dbSNP: rs63751243
rs63751243
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0751072
Disease:
Frontotemporal Lobar Degeneration
0.010 GeneticVariation BEFREE Patients with the c.26C>A mutation appeared to have a younger age at onset of FTLD and at death and more parkinsonian features than those with other GRN mutations. 21482928 2011
dbSNP: rs9897526
rs9897526
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0236642
Disease:
Pick Disease of the Brain
0.010 GeneticVariation BEFREE The V363I variation was associated with frontotemporal dementia only in the proband which was also homozygous for the A allele of the progranulin single-nucleotide polymorphism rs9897526 and for methionine at codon 129 of the prion protein gene. 21343707 2011
dbSNP: rs9897526
rs9897526
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0338451
Disease:
Frontotemporal dementia
0.010 GeneticVariation BEFREE The V363I variation was associated with frontotemporal dementia only in the proband which was also homozygous for the A allele of the progranulin single-nucleotide polymorphism rs9897526 and for methionine at codon 129 of the prion protein gene. 21343707 2011
dbSNP: rs2879096
rs2879096
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0026769
Disease:
Multiple Sclerosis
0.010 GeneticVariation BEFREE No significant differences were observed, but by stratifying according to MS subtypes, a significant increased frequency of the rs2879096 TT genotype was found in primary progressive MS (PPMS) patients versus controls (16.0 vs 3.5%, P=0.023, odds ratio (OR) 5.2, 95% confidence interval (CI) 1.2-21.4). 20463744 2010
dbSNP: rs553119528
rs553119528
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0011265
Disease:
Presenile dementia
0.010 GeneticVariation BEFREE We recently reported a Spanish family with progressive non-fluent aphasia and dementia in which a novel C521Y mutation segregates with disease. 20028451 2010
dbSNP: rs553119528
rs553119528
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0497327
Disease:
Dementia
0.010 GeneticVariation BEFREE We recently reported a Spanish family with progressive non-fluent aphasia and dementia in which a novel C521Y mutation segregates with disease. 20028451 2010
dbSNP: rs776198499
rs776198499
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0036341
Disease:
Schizophrenia
0.010 GeneticVariation BEFREE A new GRN variant of unknown significance (c.620T>C, p.Met207Thr) was found in 1 patient with schizophrenia with TDP-43 pathology. 20937952 2010
dbSNP: rs776198499
rs776198499
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0036341
Disease:
Schizophrenia
0.010 GeneticVariation BEFREE A new GRN variant of unknown significance (c.620T>C, p.Met207Thr) was found in 1 patient with schizophrenia with TDP-43 pathology. 20937952 2010
dbSNP: rs4792939
rs4792939
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0002395
Disease:
Alzheimer's Disease
0.010 GeneticVariation BEFREE However, stratification according to gender revealed a significant male-specific allele, genotype and haplotype association between AD and GRN SNPs rs4792939, rs850713, and rs5848. 19016491 2009
dbSNP: rs5848
rs5848
Entrez Id: 2896;284069
Gene Symbol: GRN;FAM171A2
GRN;FAM171A2
CUI: C1843792
Disease:
FRONTOTEMPORAL LOBAR DEGENERATION WITH TDP43 INCLUSIONS, GRN-RELATED
0.010 GeneticVariation BEFREE A single nucleotide polymorphism in the 3'-untranslated region of the progranulin gene (GRN; 3'UTR+78C>T; rs5848) was reported to alter the risk for frontotemporal lobar degeneration with ubiquitin-positive inclusions (FTLD-U). rs5848 is located within a micro-RNA binding site and affects the expression of GRN. 19473366 2009
dbSNP: rs34424835
rs34424835
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0002736
Disease:
Amyotrophic Lateral Sclerosis
0.010 GeneticVariation BEFREE Moreover, common variants (rs9897526, rs34424835, and rs850713) and haplotypes were significantly associated with a reduction in age at onset and a shorter survival after onset of ALS in both the Belgian and the Dutch studies. 18184915 2008
dbSNP: rs533451404
rs533451404
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0002395
Disease:
Alzheimer's Disease
0.010 GeneticVariation BEFREE It leads to an amino acidic change (p.Gly35Arg) and was observed in a patient with late onset AD. 18752597 2008
dbSNP: rs63750541
rs63750541
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0751072
Disease:
Frontotemporal Lobar Degeneration
0.010 GeneticVariation BEFREE In addition, two non-synonymous changes were detected: G168S change in exon 5 was found in a single patient, with no family history, who showed a mixed FTLD/MND picture and A324T change in exon 9 was found in two cases; one case of frontotemporal dementia (FTD) with a sister with FTD+MND and the other in a case of progressive non-fluent aphasia (PNFA) without any apparent family history. 18192287 2008
dbSNP: rs63750541
rs63750541
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0085084
Disease:
Motor Neuron Disease
0.010 GeneticVariation BEFREE In addition, two non-synonymous changes were detected: G168S change in exon 5 was found in a single patient, with no family history, who showed a mixed FTLD/MND picture and A324T change in exon 9 was found in two cases; one case of frontotemporal dementia (FTD) with a sister with FTD+MND and the other in a case of progressive non-fluent aphasia (PNFA) without any apparent family history. 18192287 2008
dbSNP: rs63750541
rs63750541
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0751706
Disease:
Primary Progressive Nonfluent Aphasia
0.010 GeneticVariation BEFREE In addition, two non-synonymous changes were detected: G168S change in exon 5 was found in a single patient, with no family history, who showed a mixed FTLD/MND picture and A324T change in exon 9 was found in two cases; one case of frontotemporal dementia (FTD) with a sister with FTD+MND and the other in a case of progressive non-fluent aphasia (PNFA) without any apparent family history. 18192287 2008
dbSNP: rs63750541
rs63750541
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0338451
Disease:
Frontotemporal dementia
0.010 GeneticVariation BEFREE In addition, two non-synonymous changes were detected: G168S change in exon 5 was found in a single patient, with no family history, who showed a mixed FTLD/MND picture and A324T change in exon 9 was found in two cases; one case of frontotemporal dementia (FTD) with a sister with FTD+MND and the other in a case of progressive non-fluent aphasia (PNFA) without any apparent family history. 18192287 2008
dbSNP: rs63750742
rs63750742
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0030567
Disease:
Parkinson Disease
0.010 GeneticVariation BEFREE At this stage and in the absence of functional data, it remains unclear whether p.Asp33Glu and p.Arg514Met are biologically relevant to PD pathogenesis in the mutation carriers. 18838661 2008