PTGS2, prostaglandin-endoperoxide synthase 2, 5743

N. diseases: 1234; N. variants: 27
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs20417
rs20417
Entrez Id: 5743;103752588
Gene Symbol: PTGS2;PACERR
PTGS2;PACERR
CUI: C0374997
Disease:
Helicobacter pylori (H. pylori) infection in conditions classified elsewhere and of unspecified site
0.010 GeneticVariation BEFREE Helicobacter pylori positive patients and those with the COX-2 rs20417 polymorphism had a higher risk of developing GC. 31045826 2019
dbSNP: rs20417
rs20417
Entrez Id: 5743;103752588
Gene Symbol: PTGS2;PACERR
PTGS2;PACERR
CUI: C0024623
Disease:
Malignant neoplasm of stomach
0.010 GeneticVariation BEFREE This meta-analysis of 15 case-control studies provides strong evidence that the COX-2 rs20417 polymorphism increases the risk of GC susceptibility in general populations, especially in Asians. 31045826 2019
dbSNP: rs20417
rs20417
Entrez Id: 5743;103752588
Gene Symbol: PTGS2;PACERR
PTGS2;PACERR
CUI: C0699791
Disease:
Stomach Carcinoma
0.010 GeneticVariation BEFREE This meta-analysis of 15 case-control studies provides strong evidence that the COX-2 rs20417 polymorphism increases the risk of GC susceptibility in general populations, especially in Asians. 31045826 2019
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C2752147
Disease:
XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C
0.010 GeneticVariation BEFREE Three SNPs showed a main association with advanced prostate cancer risk after multiple testing correction: catalase (CAT) rs511895, prostaglandin-endoperoxide synthase 2 (PTGS2) rs5275, and xeroderma pigmentosum group C (XPC) rs2228001. 29697282 2019
dbSNP: rs689466
rs689466
Entrez Id: 5743;103752588
Gene Symbol: PTGS2;PACERR
PTGS2;PACERR
CUI: C4699512
Disease:
Large-artery atherosclerosis (embolus/thrombosis)
0.010 GeneticVariation BEFREE At rs689466, AA genotype may increase the susceptibility of large-artery atherosclerosis (LAA). 31735164 2019
dbSNP: rs689466
rs689466
Entrez Id: 5743;103752588
Gene Symbol: PTGS2;PACERR
PTGS2;PACERR
CUI: C0026691
Disease:
Mucocutaneous Lymph Node Syndrome
0.010 GeneticVariation BEFREE The AA genotype and A allele of rs689466 confer predisposing factors to KD. 30321073 2019
dbSNP: rs689466
rs689466
Entrez Id: 5743;103752588
Gene Symbol: PTGS2;PACERR
PTGS2;PACERR
CUI: C0948008
Disease:
Ischemic stroke
0.010 GeneticVariation BEFREE COX - 1(rs1330344, rs3842788) and COX-2 rs689466 interacted in small vessel occlusion (SVO), but had no additive effect with ischemic stroke and other subtypes. 31735164 2019
dbSNP: rs20417
rs20417
Entrez Id: 5743;103752588
Gene Symbol: PTGS2;PACERR
PTGS2;PACERR
CUI: C0029443
Disease:
Osteomyelitis
0.010 GeneticVariation BEFREE However, no significant link was found between rs20417 and susceptibility to post-traumatic osteomyelitis in this Chinese cohort. 28682162 2018
dbSNP: rs4648308
rs4648308
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C1269683
Disease:
Major Depressive Disorder
0.010 GeneticVariation BEFREE This study investigated the effects of BanI polymorphism of cPLA2 gene and COX-2 rs4648308 genotypes on somatic symptoms and inflammatory marker in patients with MDD. 28108057 2018
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0152013
Disease:
Adenocarcinoma of lung (disorder)
0.010 GeneticVariation BEFREE Polymorphism of rs5275 was strongly associated with a reduced risk of lung adenocarcinoma according to stratified analysis by pathological types. 30170377 2018
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C2931822
Disease:
Nasopharyngeal carcinoma
0.010 GeneticVariation BEFREE Based on these results, we concluded that COX-2 gene rs5275 variant contributes to NPC risk in a Chinese population. 30087034 2018
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0011860
Disease:
Diabetes Mellitus, Non-Insulin-Dependent
0.010 GeneticVariation BEFREE A significant association was observed for genotype distribution of COX2 rs5275 site between control and T2DM cases (p = 0.042). 30293595 2018
dbSNP: rs689466
rs689466
Entrez Id: 5743;103752588
Gene Symbol: PTGS2;PACERR
PTGS2;PACERR
CUI: C0029443
Disease:
Osteomyelitis
0.010 GeneticVariation BEFREE To our knowledge, we reported for the first time that COX-2 gene polymorphism rs689466 may contribute to the increased susceptibility to post-traumatic osteomyelitis in Chinese population. 28682162 2018
dbSNP: rs689466
rs689466
Entrez Id: 5743;103752588
Gene Symbol: PTGS2;PACERR
PTGS2;PACERR
CUI: C0011860
Disease:
Diabetes Mellitus, Non-Insulin-Dependent
0.010 GeneticVariation BEFREE According to our data, the rs5275 variant of the COX2 in the 3'-UTR may contribute to the etiology or modulate the risk of T2DM, whereas the rs689466 variant of the COX2 gene is not associated with T2DM risk. 30293595 2018
dbSNP: rs689466
rs689466
Entrez Id: 5743;103752588
Gene Symbol: PTGS2;PACERR
PTGS2;PACERR
CUI: C0027651
Disease:
Neoplasms
0.010 GeneticVariation BEFREE Likewise, the haplotype *4, which contains variant rs689466, was associated with shorter disease-free survival among obese patients (HR<sub>adj</sub> = 3.3; 95% CI = 1.8-6.0), either in luminal (HR<sub>adj</sub> = 3.5; 95% CI = 1.6-7.3) or HER2-like and triple-negative (HR<sub>adj</sub> = 3.1; 95% CI = 1.1-8.9) tumors. 29321183 2018
dbSNP: rs13306038
rs13306038
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0009952
Disease:
Febrile Convulsions
0.010 GeneticVariation BEFREE To investigate possible association of FS with single nucleotide polymorphisms (SNPs) in prostaglandin-endoperoxide synthase-2 (prostaglandin G/H synthase-2; PTGS2/cyclooxygenase-2; COX2) gene involving in thermoregulatory pathway, eight SNPs, rs689465, rs689466, rs20417, rs13306038, rs201931599, rs689470, rs4648306 and rs4648308, along with 2 previously reported variations in IL1RN (86-bp VNTR) and IL10 (rs1900872) were genotyped and utilized for case-control association studies on 35 FS and 31 non-FS controls. 27871023 2017
dbSNP: rs201931599
rs201931599
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0009952
Disease:
Febrile Convulsions
0.010 GeneticVariation BEFREE To investigate possible association of FS with single nucleotide polymorphisms (SNPs) in prostaglandin-endoperoxide synthase-2 (prostaglandin G/H synthase-2; PTGS2/cyclooxygenase-2; COX2) gene involving in thermoregulatory pathway, eight SNPs, rs689465, rs689466, rs20417, rs13306038, rs201931599, rs689470, rs4648306 and rs4648308, along with 2 previously reported variations in IL1RN (86-bp VNTR) and IL10 (rs1900872) were genotyped and utilized for case-control association studies on 35 FS and 31 non-FS controls. 27871023 2017
dbSNP: rs20417
rs20417
Entrez Id: 5743;103752588
Gene Symbol: PTGS2;PACERR
PTGS2;PACERR
CUI: C0009952
Disease:
Febrile Convulsions
0.010 GeneticVariation BEFREE To investigate possible association of FS with single nucleotide polymorphisms (SNPs) in prostaglandin-endoperoxide synthase-2 (prostaglandin G/H synthase-2; PTGS2/cyclooxygenase-2; COX2) gene involving in thermoregulatory pathway, eight SNPs, rs689465, rs689466, rs20417, rs13306038, rs201931599, rs689470, rs4648306 and rs4648308, along with 2 previously reported variations in IL1RN (86-bp VNTR) and IL10 (rs1900872) were genotyped and utilized for case-control association studies on 35 FS and 31 non-FS controls. 27871023 2017
dbSNP: rs4648306
rs4648306
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0009952
Disease:
Febrile Convulsions
0.010 GeneticVariation BEFREE To investigate possible association of FS with single nucleotide polymorphisms (SNPs) in prostaglandin-endoperoxide synthase-2 (prostaglandin G/H synthase-2; PTGS2/cyclooxygenase-2; COX2) gene involving in thermoregulatory pathway, eight SNPs, rs689465, rs689466, rs20417, rs13306038, rs201931599, rs689470, rs4648306 and rs4648308, along with 2 previously reported variations in IL1RN (86-bp VNTR) and IL10 (rs1900872) were genotyped and utilized for case-control association studies on 35 FS and 31 non-FS controls. 27871023 2017
dbSNP: rs4648308
rs4648308
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0009952
Disease:
Febrile Convulsions
0.010 GeneticVariation BEFREE To investigate possible association of FS with single nucleotide polymorphisms (SNPs) in prostaglandin-endoperoxide synthase-2 (prostaglandin G/H synthase-2; PTGS2/cyclooxygenase-2; COX2) gene involving in thermoregulatory pathway, eight SNPs, rs689465, rs689466, rs20417, rs13306038, rs201931599, rs689470, rs4648306 and rs4648308, along with 2 previously reported variations in IL1RN (86-bp VNTR) and IL10 (rs1900872) were genotyped and utilized for case-control association studies on 35 FS and 31 non-FS controls. 27871023 2017
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C4721698
Disease:
Metastatic Renal Cell Carcinoma
0.010 GeneticVariation BEFREE It is the first time that association of rs5275 with survival in mRCC patients is described. 28117391 2017
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0278678
Disease:
Metastatic Renal Cell Cancer
0.010 GeneticVariation BEFREE It is the first time that association of rs5275 with survival in mRCC patients is described. 28117391 2017
dbSNP: rs5277
rs5277
Entrez Id: 5743;103752588
Gene Symbol: PTGS2;PACERR
PTGS2;PACERR
CUI: C1299433
Disease:
Left main coronary artery disease
0.010 GeneticVariation BEFREE In conclusion, we demonstrate that COX-2 rs5277</span> C allele increases the risk of left main coronary artery lesion and is also correlated with poor prognosis of LMCAD patients with CABG therapy. 28194409 2017
dbSNP: rs689465
rs689465
Entrez Id: 5743;103752588
Gene Symbol: PTGS2;PACERR
PTGS2;PACERR
CUI: C0009952
Disease:
Febrile Convulsions
0.010 GeneticVariation BEFREE To investigate possible association of FS with single nucleotide polymorphisms (SNPs) in prostaglandin-endoperoxide synthase-2 (prostaglandin G/H synthase-2; PTGS2/cyclooxygenase-2; COX2) gene involving in thermoregulatory pathway, eight SNPs, rs689465, rs689466, rs20417, rs13306038, rs201931599, rs689470, rs4648306 and rs4648308, along with 2 previously reported variations in IL1RN (86-bp VNTR) and IL10 (rs1900872) were genotyped and utilized for case-control association studies on 35 FS and 31 non-FS controls. 27871023 2017
dbSNP: rs689466
rs689466
Entrez Id: 5743;103752588
Gene Symbol: PTGS2;PACERR
PTGS2;PACERR
CUI: C0009952
Disease:
Febrile Convulsions
0.010 GeneticVariation BEFREE A single SNP (rs689466) localized at 5'-1192 of the PTGS2 gene exhibited significant association with FS (p=0.045) based on case-control allelic association analyses. 27871023 2017