PTGS2, prostaglandin-endoperoxide synthase 2, 5743

N. diseases: 1234; N. variants: 27
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.040 GeneticVariation BEFREE Crude odds ratios (ORs) with 95% confidence intervals (CIs) were used to assess the strength of association between each polymorphism and breast cancer risk under the codominant model, dominant model, and recessive model, respectively (nine studies with 6,968 cases and 9,126 controls for rs5275; three studies with 2,901 cases and 3,463 controls for rs20417; two studies with 5,551 cases and 6,208 controls for rs5277). 20033767 2010
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0678222
Disease:
Breast Carcinoma
0.040 GeneticVariation BEFREE Associations between the 8473T>C polymorphism (rs5275) in the cyclooxygenase-2 (COX-2) gene and breast cancer (BC) risk are still inconclusive and ambiguous. 25520090 2014
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.040 GeneticVariation BEFREE The rs5275 polymorphism had no association with breast cancer risk. 25214704 2014
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.040 GeneticVariation BEFREE The rs5275 polymorphism in the 3' untranslated region of the PTGS2 gene was associated with a decrease in breast cancer risk. 17214885 2007
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0678222
Disease:
Breast Carcinoma
0.040 GeneticVariation BEFREE The rs5275 polymorphism in the 3' untranslated region of the PTGS2 gene was associated with a decrease in breast cancer risk. 17214885 2007
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0678222
Disease:
Breast Carcinoma
0.040 GeneticVariation BEFREE Crude odds ratios (ORs) with 95% confidence intervals (CIs) were used to assess the strength of association between each polymorphism and breast cancer risk under the codominant model, dominant model, and recessive model, respectively (nine studies with 6,968 cases and 9,126 controls for rs5275; three studies with 2,901 cases and 3,463 controls for rs20417; two studies with 5,551 cases and 6,208 controls for rs5277). 20033767 2010
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0678222
Disease:
Breast Carcinoma
0.040 GeneticVariation BEFREE The rs5275 polymorphism had no association with breast cancer risk. 25214704 2014
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.040 GeneticVariation BEFREE Associations between the 8473T>C polymorphism (rs5275) in the cyclooxygenase-2 (COX-2) gene and breast cancer (BC) risk are still inconclusive and ambiguous. 25520090 2014
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0030193
Disease:
Pain
0.030 GeneticVariation BEFREE Controlling for these nongenetic covariates, we found that patients with CC genotypes for PTGS2 exon10+837T>C (rs5275) were at lower risk for severe pain (OR, 0.33; 95% CI, 0.11-0.97) and an additive model for TNFalpha -308GA (rs1800629; OR, 1.67; 95% CI, 1.08-2.58) and NFKBIA Ex6+50C>T (rs8904) was predictive of severe pain (OR, 0.64; 95% CI, 0.43-0.93). 19773451 2009
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C2239176
Disease:
Liver carcinoma
0.030 GeneticVariation BEFREE In the subgroup analyses stratified by ethnicity, the COX-2 -1195G/A, -765G/C, and +8473T/C were all associated with an increased HCC risk in Asian populations (rs689466 A vs. G: OR = 1.346, P = 0.001, 95% CI: 1.137-1.595, I<sup>2</sup> = 0.0%, P<sub>heterogeneity</sub> = 0.869; rs20417 CC vs. GG + GC: OR = 3.069, P = 0.013, 95% CI: 1.265-7.447; rs5275 CC vs. TT + TC: OR = 1.626, P = 0.020, 95% CI: 1.079-2.452, I<sup>2</sup> = 0.0%, P<sub>heterogeneity</sub> = 0.495). 29578159 2018
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C2239176
Disease:
Liver carcinoma
0.030 GeneticVariation BEFREE Similarly, no significant association of the Cox-2 rs5275 (+ 8473 T/C) polymorphism and HCC risk was found under any of the studied contrasts (C vs. T, TC vs. TT, CC vs. TT, CC + TC vs. TT, CC vs. TC + TT). 25400773 2014
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0006826
Disease:
Malignant Neoplasms
0.030 GeneticVariation BEFREE However, in the stratified analysis by the type of cancer or ethnicity population, NSAID users homozygous for the major allele (TT) in rs5275 demonstrated significantly decreased cancer risk compared with non-NSAID users in cancer type not involving colorectal adenoma (OR = 0.70, 95% CI = 0.59-0.83) and among the USA population (OR = 0.67, 95% CI = 0.56-0.82). 23967159 2013
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0006826
Disease:
Malignant Neoplasms
0.030 GeneticVariation BEFREE Functional coding region polymorphisms -1195A>G (rs689466), -765G>C (rs20417), and +8473T>C (rs5275) in the COX-2 gene have recently been shown to be associated with several human cancers but their association with HCC has yet to be investigated. 21042835 2011
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0030193
Disease:
Pain
0.030 GeneticVariation BEFREE Of the 10 SNPs evaluated in LTA and PTGS2 genes, 3 were associated with pain severity (rs5277; rs1799964), social function (rs5277) and mental health (rs5275). 22464751 2012
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C2239176
Disease:
Liver carcinoma
0.030 GeneticVariation BEFREE Functional coding region polymorphisms -1195A>G (rs689466), -765G>C (rs20417), and +8473T>C (rs5275) in the COX-2 gene have recently been shown to be associated with several human cancers but their association with HCC has yet to be investigated. 21042835 2011
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0006826
Disease:
Malignant Neoplasms
0.030 GeneticVariation BEFREE The COX-2 genotypes for 7 single-nucleotide polymorphisms (rs2745557, rs5277, rs2066826, rs4648261, rs4648262, rs2206593, and rs5275) were determined in 162 pancreatic cancer patients and 170 control subjects without cancer who were matched for age and sex. 21705955 2011
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0030193
Disease:
Pain
0.030 GeneticVariation BEFREE Finally, we identified genetic variants in COX-2 (haplotype composed of rs2383515 G, rs5277 G, rs5275 T, and rs2206593 A) associated with post-treatment pain after endodontic treatment (P = .025). 26081267 2015
dbSNP: rs2066826
rs2066826
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0684249
Disease:
Carcinoma of lung
0.020 GeneticVariation BEFREE The Cox-2 intron 6 (rs2066826) genotypes were distributed differently between the lung cancer and control groups. 20530427 2010
dbSNP: rs2066826
rs2066826
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0684249
Disease:
Carcinoma of lung
0.020 GeneticVariation BEFREE Additionally, rs2066826 polymorphism manifested a strong correlation with increased risk of lung cancer under 5 genetic models. 26624903 2015
dbSNP: rs2066826
rs2066826
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C1306460
Disease:
Primary malignant neoplasm of lung
0.020 GeneticVariation BEFREE Additionally, rs2066826 polymorphism manifested a strong correlation with increased risk of lung cancer under 5 genetic models. 26624903 2015
dbSNP: rs2066826
rs2066826
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C1306460
Disease:
Primary malignant neoplasm of lung
0.020 GeneticVariation BEFREE The Cox-2 intron 6 (rs2066826) genotypes were distributed differently between the lung cancer and control groups. 20530427 2010
dbSNP: rs2066826
rs2066826
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0242379
Disease:
Malignant neoplasm of lung
0.020 GeneticVariation BEFREE The Cox-2 intron 6 (rs2066826) genotypes were distributed differently between the lung cancer and control groups. 20530427 2010
dbSNP: rs2066826
rs2066826
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0242379
Disease:
Malignant neoplasm of lung
0.020 GeneticVariation BEFREE Additionally, rs2066826 polymorphism manifested a strong correlation with increased risk of lung cancer under 5 genetic models. 26624903 2015
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C1306460
Disease:
Primary malignant neoplasm of lung
0.020 GeneticVariation BEFREE Our meta-analysis demonstrated that COX-2 rs5275 and rs689466 polymorphism significantly decrease the risk of lung cancer in Asians but not in Caucasians, indicating COX-2 could serve as a potential diagnostic marker for lung cancer. 30170377 2018
dbSNP: rs5275
rs5275
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
CUI: C0376358
Disease:
Malignant neoplasm of prostate
0.020 GeneticVariation BEFREE In a hospital-based case/control study, 195 subjects with PCa and 250 healthy controls were investigated for the association of COX-2 -765 G>C (rs20417) and +8473 T>C (rs5275) promoter polymorphism with PCa susceptibility using the polymerase chain reaction restriction fragment length polymorphism (PCR-RFLP) method. 22023987 2011