rs3077, HLA-DPA1

N. diseases: 16
Source: ALL
Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
Rheumatoid Arthritis
CUI: C0003873
Disease: Rheumatoid Arthritis
0.700 GeneticVariation GWASDB TRAF1-C5 as a risk locus for rheumatoid arthritis--a genomewide study. 17804836 2007
Hepatitis B
CUI: C0019163
Disease: Hepatitis B
0.900 GeneticVariation GWASDB A genome-wide association study identifies variants in the HLA-DP locus associated with chronic hepatitis B in Asians. 19349983 2009
Rheumatoid Arthritis
CUI: C0003873
Disease: Rheumatoid Arthritis
0.700 GeneticVariation GWASDB REL, encoding a member of the NF-kappaB family of transcription factors, is a newly defined risk locus for rheumatoid arthritis. 19503088 2009
Hepatitis B, Chronic
CUI: C0524909
Disease: Hepatitis B, Chronic
0.760 GeneticVariation BEFREE A genome-wide association study identified single nucleotide polymorphisms (SNPs) rs3077 and rs9277535 located in the 3' untranslated regions of human leukocyte antigen (HLA) class II genes HLA-DPA1 and HLA-DPB1, respectively, as the independent variants most strongly associated with chronic hepatitis B. 21346778 2011
Hepatitis B
CUI: C0019163
Disease: Hepatitis B
0.900 GeneticVariation BEFREE HLA - DPA1 rs3077 T was strongly associated with decreased risk of chronic HBV infection (odds ratio, .62; P = .001), consistent with the previous report. 21402545 2011
Liver carcinoma
CUI: C2239176
Disease: Liver carcinoma
0.740 GeneticVariation BEFREE However, rs3077 was not associated with the development of cirrhosis or hepatocellular carcinoma. 21402545 2011
Cirrhosis
CUI: C1623038
Disease: Cirrhosis
0.010 GeneticVariation BEFREE However, rs3077 was not associated with the development of cirrhosis or hepatocellular carcinoma. 21402545 2011
Liver Cirrhosis
CUI: C0023890
Disease: Liver Cirrhosis
0.010 GeneticVariation BEFREE However, rs3077 was not associated with the development of cirrhosis or hepatocellular carcinoma. 21402545 2011
Hepatitis B, Chronic
CUI: C0524909
Disease: Hepatitis B, Chronic
0.760 GeneticVariation BEFREE Chronic hepatitis B susceptibility loci in HLA-DP region (rs3077 and rs9277535) identified by genome-wide scan in Japanese population were validated in Chinese population. 21408128 2011
Hepatitis B
CUI: C0019163
Disease: Hepatitis B
0.900 GeneticVariation GWASCAT A genome-wide association study of chronic hepatitis B identified novel risk locus in a Japanese population. 21750111 2011
Hepatitis B
CUI: C0019163
Disease: Hepatitis B
0.900 GeneticVariation GWASDB A genome-wide association study of chronic hepatitis B identified novel risk locus in a Japanese population. 21750111 2011
Complete atrioventricular block
CUI: C0151517
Disease: Complete atrioventricular block
0.050 GeneticVariation BEFREE Association of CHB with SNPs rs2856718 and rs7453920 remains significant even after stratification with rs3077 and rs9277535, indicating independent effect of HLA-DQ variants on CHB susceptibility (P-value of 1.52 × 10(-21)- 2.38 × 10(-30)). 21750111 2011
Hepatitis B
CUI: C0019163
Disease: Hepatitis B
0.900 GeneticVariation BEFREE Recent genome-wide association studies showed that four single-nucleotide polymorphisms (SNPs) in human leukocyte antigen (HLA)-DP (rs3077 and rs9277535) and HLA-DQ (rs2856718 and rs7453920) were associated with chronic hepatitis B virus (HBV) infection in Japanese populations. 22105689 2012
Liver carcinoma
CUI: C2239176
Disease: Liver carcinoma
0.740 GeneticVariation BEFREE In addition, HLA-DP rs3077 showed an approaching significant effect on susceptibility to HBV persistent infection and HCC development when considering multiple testing adjustments. 22105689 2012
Hepatitis B
CUI: C0019163
Disease: Hepatitis B
0.900 GeneticVariation BEFREE A highly significant association of HLA-DPA1 rs3077 with HBV infection was observed in Caucasians. 22448225 2012
Complete atrioventricular block
CUI: C0151517
Disease: Complete atrioventricular block
0.050 GeneticVariation BEFREE However, no significant association was seen for rs3077 with progressive CHB infection versus inactive HBsAg carrier status (OR = 2.7, 95% CI: 0.6-11.1; p = 0.31). 22448225 2012
Hepatitis B
CUI: C0019163
Disease: Hepatitis B
0.900 GeneticVariation BEFREE The results of meta-analysis pooling all eligible studies also showed that rs3077-A and rs9277535-A alleles were associated with an increased clearance rate to HBV infection (rs3077: OR=0.57, 95% CI=0.44-0.75; rs9277535: OR=0.56, 95% CI=0.47-0.63). 22543033 2012
Hepatitis B
CUI: C0019163
Disease: Hepatitis B
0.900 GeneticVariation GWASDB Genome-wide association study confirming association of HLA-DP with protection against chronic hepatitis B and viral clearance in Japanese and Korean. 22737229 2012
Hepatitis B
CUI: C0019163
Disease: Hepatitis B
0.900 GeneticVariation GWASCAT Genome-wide association study confirming association of HLA-DP with protection against chronic hepatitis B and viral clearance in Japanese and Korean. 22737229 2012
Hepatitis B, Chronic
CUI: C0524909
Disease: Hepatitis B, Chronic
0.760 GeneticVariation BEFREE We also found that the HLA-DPA1 and HLA-DPB1 genes were significantly associated with protective effects against chronic hepatitis B (CHB) in Japanese, Korean and other Asian populations, including Chinese and Thai individuals (P(meta) = 4.40×10⁻¹⁹ for rs3077 and P(meta) = 1.28×10⁻¹⁵ for rs9277542). 22737229 2012
Complete atrioventricular block
CUI: C0151517
Disease: Complete atrioventricular block
0.050 GeneticVariation BEFREE We also found that the HLA-DPA1 and HLA-DPB1 genes were significantly associated with protective effects against chronic hepatitis B (CHB) in Japanese, Korean and other Asian populations, including Chinese and Thai individuals (P(meta) = 4.40×10⁻¹⁹ for rs3077 and P(meta) = 1.28×10⁻¹⁵ for rs9277542). 22737229 2012
Liver carcinoma
CUI: C2239176
Disease: Liver carcinoma
0.740 GeneticVariation GWASDB Genetic variants in STAT4 and HLA-DQ genes confer risk of hepatitis B virus-related hepatocellular carcinoma. 23242368 2013
Hepatitis B
CUI: C0019163
Disease: Hepatitis B
0.900 GeneticVariation BEFREE Two single nucleotide polymorphisms (SNP), rs3077 near HLA-DPA1 region and rs9277535 near HLA-DPB1 region, have been shown to be associated with HBV persistence after acute HBV infection. 23326374 2013
Malignant tumor of cervix
CUI: C0007847
Disease: Malignant tumor of cervix
0.010 GeneticVariation BEFREE These findings indicate that HLA-DP rs3077 and rs9277535 were candidate susceptibility markers for cervical cancer in Chinese females. 23428460 2013
Cervix carcinoma
CUI: C0302592
Disease: Cervix carcinoma
0.010 GeneticVariation BEFREE These findings indicate that HLA-DP rs3077 and rs9277535 were candidate susceptibility markers for cervical cancer in Chinese females. 23428460 2013