rs3077, HLA-DPA1

N. diseases: 16
Source: ALL
Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
Hepatitis B, Chronic
CUI: C0524909
Disease: Hepatitis B, Chronic
0.760 GeneticVariation BEFREE Chronic hepatitis B susceptibility loci in HLA-DP region (rs3077 and rs9277535) identified by genome-wide scan in Japanese population were validated in Chinese population. 21408128 2011
Hepatitis B
CUI: C0019163
Disease: Hepatitis B
0.900 GeneticVariation GWASDB A genome-wide association study identified new variants associated with the risk of chronic hepatitis B. 23760081 2013
Hepatitis B, Chronic
CUI: C0524909
Disease: Hepatitis B, Chronic
0.760 GeneticVariation GWASCAT A genome-wide association study identified new variants associated with the risk of chronic hepatitis B. 23760081 2013
Hepatitis B, Chronic
CUI: C0524909
Disease: Hepatitis B, Chronic
0.760 GeneticVariation BEFREE A genome-wide association study identified single nucleotide polymorphisms (SNPs) rs3077 and rs9277535 located in the 3' untranslated regions of human leukocyte antigen (HLA) class II genes HLA-DPA1 and HLA-DPB1, respectively, as the independent variants most strongly associated with chronic hepatitis B. 21346778 2011
Hepatitis B
CUI: C0019163
Disease: Hepatitis B
0.900 GeneticVariation GWASDB A genome-wide association study identifies variants in the HLA-DP locus associated with chronic hepatitis B in Asians. 19349983 2009
Hepatitis B
CUI: C0019163
Disease: Hepatitis B
0.900 GeneticVariation GWASCAT A genome-wide association study of chronic hepatitis B identified novel risk locus in a Japanese population. 21750111 2011
Hepatitis B
CUI: C0019163
Disease: Hepatitis B
0.900 GeneticVariation GWASDB A genome-wide association study of chronic hepatitis B identified novel risk locus in a Japanese population. 21750111 2011
Hepatitis B
CUI: C0019163
Disease: Hepatitis B
0.900 GeneticVariation BEFREE A highly significant association of HLA-DPA1 rs3077 with HBV infection was observed in Caucasians. 22448225 2012
Vasculitis of the skin
CUI: C0262988
Disease: Vasculitis of the skin
0.010 GeneticVariation BEFREE Additionally, rs3077 AA genotype carriers showed lower concentration of inflammatory cytokines and lower cutaneous vasculitis incidence than did the other two genotype. 28094303 2017
Complete atrioventricular block
CUI: C0151517
Disease: Complete atrioventricular block
0.050 GeneticVariation BEFREE Association of CHB with SNPs rs2856718 and rs7453920 remains significant even after stratification with rs3077 and rs9277535, indicating independent effect of HLA-DQ variants on CHB susceptibility (P-value of 1.52 × 10(-21)- 2.38 × 10(-30)). 21750111 2011
Hepatitis B
CUI: C0019163
Disease: Hepatitis B
0.900 GeneticVariation BEFREE Both rs3077 and rs2284553 polymorphisms were not associated with HBV viral load in terms of allelic frequency, genotypic frequency, dominant/recessive gene action. rs9808753 (G allele) was associated with a reduced chance of "undetectable HBV DNA" for patients below the age of 50 years in allelic frequency analysis (odds ratio 0.562; 95% confidence interval, 0.326-0.967; P value = 0.037). 23980639 2014
Hepatitis B, Chronic
CUI: C0524909
Disease: Hepatitis B, Chronic
0.760 GeneticVariation GWASCAT Genetic variants in five novel loci including CFB and CD40 predispose to chronic hepatitis B. 25802187 2015
Liver carcinoma
CUI: C2239176
Disease: Liver carcinoma
0.740 GeneticVariation GWASDB Genetic variants in STAT4 and HLA-DQ genes confer risk of hepatitis B virus-related hepatocellular carcinoma. 23242368 2013
Hepatitis B
CUI: C0019163
Disease: Hepatitis B
0.900 GeneticVariation GWASDB Genome-wide association study confirming association of HLA-DP with protection against chronic hepatitis B and viral clearance in Japanese and Korean. 22737229 2012
Hepatitis B
CUI: C0019163
Disease: Hepatitis B
0.900 GeneticVariation GWASCAT Genome-wide association study confirming association of HLA-DP with protection against chronic hepatitis B and viral clearance in Japanese and Korean. 22737229 2012
Hepatitis B
CUI: C0019163
Disease: Hepatitis B
0.900 GeneticVariation BEFREE HLA - DPA1 rs3077 T was strongly associated with decreased risk of chronic HBV infection (odds ratio, .62; P = .001), consistent with the previous report. 21402545 2011
Hepatitis B
CUI: C0019163
Disease: Hepatitis B
0.900 GeneticVariation BEFREE HLA-DP SNPs rs3077, rs9277378 and rs3128917 were associated with chronicity of HBV disease in the Chinese. 23825586 2013
Complete atrioventricular block
CUI: C0151517
Disease: Complete atrioventricular block
0.050 GeneticVariation BEFREE However, no significant association was seen for rs3077 with progressive CHB infection versus inactive HBsAg carrier status (OR = 2.7, 95% CI: 0.6-11.1; p = 0.31). 22448225 2012
Cirrhosis
CUI: C1623038
Disease: Cirrhosis
0.010 GeneticVariation BEFREE However, rs3077 was not associated with the development of cirrhosis or hepatocellular carcinoma. 21402545 2011
Liver Cirrhosis
CUI: C0023890
Disease: Liver Cirrhosis
0.010 GeneticVariation BEFREE However, rs3077 was not associated with the development of cirrhosis or hepatocellular carcinoma. 21402545 2011
Liver carcinoma
CUI: C2239176
Disease: Liver carcinoma
0.740 GeneticVariation BEFREE However, rs3077 was not associated with the development of cirrhosis or hepatocellular carcinoma. 21402545 2011
Liver carcinoma
CUI: C2239176
Disease: Liver carcinoma
0.740 GeneticVariation BEFREE However, the experiment showed that HLA-DP rs3077, rs9277535 and rs7453920 did not associate with HCC development (dominant model, rs3077, OR = 0.86, 95%CI = 0.62-1.18; rs9277535, OR = 0.94, 95%CI = 0.68-1.30; rs7453920, OR = 0.75, 95%CI = 0.44-1.27). 25365208 2014
Liver carcinoma
CUI: C2239176
Disease: Liver carcinoma
0.740 GeneticVariation BEFREE In addition, HLA-DP rs3077 showed an approaching significant effect on susceptibility to HBV persistent infection and HCC development when considering multiple testing adjustments. 22105689 2012
Hepatitis B
CUI: C0019163
Disease: Hepatitis B
0.900 GeneticVariation BEFREE In addition, Uygurs have higher frequencies of HLA-DP/DQ protective alleles (72.5% for rs3077, 76.6% for rs9277535 and 26.8% for rs7453920) than Tibetans (51.7% for rs3077, 52.5% for rs9277535 and 18.5% for rs7453920)(all P < 0.05), and a lower prevalence of HBV infection as previously reported. 25041342 2015
Encephalitis, St. Louis
CUI: C0014060
Disease: Encephalitis, St. Louis
0.010 GeneticVariation BEFREE In conclusion, HLA-DP polymorphisms (rs3077 and rs9277535) were associated with SLE susceptibility and the levels of some inflammatory cytokines in SLE patients. 28094303 2017