DisGeNET - a database of gene-disease associations

Source: ALL

Variants associated to the Disease: Primary malignant neoplasm of lung ×

Variants associated to the Gene: LIG1 ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs156641	LIG1	0.882	0.080	19	48128151	intron variant	C/T	snv		0.29	3
rs20579	LIG1	0.882	0.080	19	48165573	5 prime UTR variant	G/A;C	snv	0.13		3
rs20581	LIG1	0.882	0.080	19	48119170	synonymous variant	A/G	snv	0.58	0.64	3
rs3730859	LIG1	0.882	0.080	19	48161802	intron variant	G/A	snv		0.30	3
rs439132	LIG1	0.882	0.080	19	48165657	intron variant	T/C	snv	5.6E-02	9.6E-02	3
rs3730931	LIG1 ; LOC107985293	0.882	0.080	19	48143984	intron variant	T/C	snv	0.12	0.15	3