Source: GWASCAT

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs3816183
rs3816183
HAAO ; MTA3
0.925 0.120 2 42788579 missense variant T/C snv 0.80 0.80
CUI: C0848558
Disease: Hypospadias
Hypospadias 		0.710 1.000 1 2014 2019
dbSNP: rs4554617
rs4554617
DGKK
0.925 0.120 X 50460404 intron variant A/C snv 0.45
CUI: C0848558
Disease: Hypospadias
Hypospadias 		0.710 1.000 1 2014 2019
dbSNP: rs6499755
rs6499755 		0.925 0.120 16 55307223 intron variant T/C snv 0.30
CUI: C0848558
Disease: Hypospadias
Hypospadias 		0.710 1.000 1 2014 2019
dbSNP: rs10214930
rs10214930
TAX1BP1
1.000 0.120 7 27745330 intron variant G/A snv 0.20
CUI: C0848558
Disease: Hypospadias
Hypospadias 		0.700 1.000 1 2014 2014
dbSNP: rs10762738
rs10762738
KCNMA1 ; KCNMA1-AS1
1.000 0.120 10 76935709 intron variant A/G snv 0.38
CUI: C0848558
Disease: Hypospadias
Hypospadias 		0.700 1.000 1 2014 2014
dbSNP: rs10979
rs10979
PHACTR2 ; PHACTR2-AS1
1.000 0.120 6 143568902 intron variant G/A snv 0.62
CUI: C0848558
Disease: Hypospadias
Hypospadias 		0.700 1.000 1 2014 2014
dbSNP: rs11749327
rs11749327
EXOC3
1.000 0.120 5 457146 non coding transcript exon variant C/A snv 0.20
CUI: C0848558
Disease: Hypospadias
Hypospadias 		0.700 1.000 1 2014 2014
dbSNP: rs13124827
rs13124827 		1.000 0.120 4 156419058 intergenic variant C/T snv 0.37
CUI: C0848558
Disease: Hypospadias
Hypospadias 		0.700 1.000 1 2014 2014
dbSNP: rs143136847
rs143136847
CCDC59
1.000 0.120 12 82354560 missense variant T/C;G snv 2.6E-05; 2.8E-03
CUI: C0848558
Disease: Hypospadias
Hypospadias 		0.700 1.000 1 2014 2014
dbSNP: rs16937456
rs16937456
LOC105375894
1.000 0.120 8 71165720 intron variant A/G;T snv
CUI: C0848558
Disease: Hypospadias
Hypospadias 		0.700 1.000 1 2014 2014
dbSNP: rs17208368
rs17208368 		1.000 0.120 16 55038095 intergenic variant C/A snv 0.14
CUI: C0848558
Disease: Hypospadias
Hypospadias 		0.700 1.000 1 2014 2014
dbSNP: rs17262815
rs17262815
CCDC26
1.000 0.120 8 129478919 intron variant T/C snv 0.13
CUI: C0848558
Disease: Hypospadias
Hypospadias 		0.700 1.000 1 2014 2014
dbSNP: rs17747401
rs17747401
ADK
1.000 0.120 10 74640406 intron variant C/T snv 0.27
CUI: C0848558
Disease: Hypospadias
Hypospadias 		0.700 1.000 1 2014 2014
dbSNP: rs1801085
rs1801085
HOXA3 ; HOXA4 ; HOXA-AS2
1.000 0.120 7 27128971 splice region variant A/G snv 0.16
CUI: C0848558
Disease: Hypospadias
Hypospadias 		0.700 1.000 1 2014 2014
dbSNP: rs1858800
rs1858800
ZFHX3
1.000 0.120 16 72990377 intron variant C/T snv 0.28
CUI: C0848558
Disease: Hypospadias
Hypospadias 		0.700 1.000 1 2014 2014
dbSNP: rs1918690
rs1918690
DNAH6
1.000 0.120 2 84679791 intron variant T/C snv 0.74
CUI: C0848558
Disease: Hypospadias
Hypospadias 		0.700 1.000 1 2014 2014
dbSNP: rs2999052
rs2999052
EEFSEC
1.000 0.120 3 128173194 intron variant T/C snv 0.30
CUI: C0848558
Disease: Hypospadias
Hypospadias 		0.700 1.000 1 2014 2014
dbSNP: rs3743104
rs3743104
GREM1
1.000 0.120 15 32731784 3 prime UTR variant A/G;T snv
CUI: C0848558
Disease: Hypospadias
Hypospadias 		0.700 1.000 1 2014 2014
dbSNP: rs3812762
rs3812762
DENND2B
1.000 0.120 11 8730093 missense variant G/C snv 0.32 0.27
CUI: C0848558
Disease: Hypospadias
Hypospadias 		0.700 1.000 1 2014 2014
dbSNP: rs417096
rs417096 		1.000 0.120 6 39760057 intergenic variant G/A;C snv 0.53
CUI: C0848558
Disease: Hypospadias
Hypospadias 		0.700 1.000 1 2014 2014
dbSNP: rs4563609
rs4563609 		1.000 0.120 5 158490267 intron variant G/A snv 0.73
CUI: C0848558
Disease: Hypospadias
Hypospadias 		0.700 1.000 1 2014 2014
dbSNP: rs7811653
rs7811653 		1.000 0.120 7 46362671 intergenic variant C/A snv 5.8E-02
CUI: C0848558
Disease: Hypospadias
Hypospadias 		0.700 1.000 1 2014 2014
dbSNP: rs8045253
rs8045253 		1.000 0.120 16 86404161 regulatory region variant T/C snv 0.33
CUI: C0848558
Disease: Hypospadias
Hypospadias 		0.700 1.000 1 2014 2014
dbSNP: rs988958
rs988958 		1.000 0.120 2 42060166 downstream gene variant G/A snv 0.25
CUI: C0848558
Disease: Hypospadias
Hypospadias 		0.700 1.000 1 2014 2014