Gene: PCAT1 ×
Source: ALL
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs6983267
rs6983267
POU5F1B ; CASC8 ; PCAT1 ; CCAT2
62 0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37 0.800 0.871 31 2007 2019
dbSNP: rs16901979
rs16901979
PCAT1 ; CASC19
17 0.724 0.480 8 127112671 intron variant C/A snv 0.16 0.800 0.955 22 2007 2019
dbSNP: rs1016343
rs1016343
PCAT1 ; PRNCR1 ; CASC19 ; PCAT2
8 0.807 0.240 8 127081052 non coding transcript exon variant C/T snv 0.20 0.700 1.000 4 2007 2015
dbSNP: rs1016342
rs1016342
PCAT1 ; PRNCR1 ; CASC19 ; PCAT2
1 1.000 0.080 8 127080210 non coding transcript exon variant C/G;T snv 0.700 1.000 1 2007 2007
dbSNP: rs1031588
rs1031588
PCAT1 ; PRNCR1 ; CASC19 ; PCAT2
1 1.000 0.080 8 127081032 non coding transcript exon variant C/A snv 0.24 0.700 1.000 1 2007 2007
dbSNP: rs1378897
rs1378897
PCAT1 ; CASC19
2 0.925 0.080 8 127110414 intron variant C/T snv 5.7E-02 0.700 1.000 1 2007 2007
dbSNP: rs1456305
rs1456305
PCAT1 ; CASC19
1 1.000 0.080 8 127115007 intron variant G/A snv 0.88 0.700 1.000 1 2007 2007
dbSNP: rs1456306
rs1456306
PCAT1 ; CASC19
2 0.925 0.080 8 127104255 intron variant G/A snv 0.23 0.700 1.000 1 2007 2007
dbSNP: rs1456314
rs1456314
PCAT1
1 1.000 0.080 8 127063445 intron variant A/G snv 0.64 0.700 1.000 1 2007 2007
dbSNP: rs1551510
rs1551510
PCAT1 ; PRNCR1 ; CASC19 ; PCAT2
1 1.000 0.080 8 127081233 non coding transcript exon variant C/T snv 0.56 0.700 1.000 1 2007 2007
dbSNP: rs17831626
rs17831626
PCAT1
1 1.000 0.080 8 127068178 intron variant G/T snv 0.31 0.700 1.000 1 2007 2007
dbSNP: rs6470494
rs6470494
PCAT1 ; CASC19 ; PCAT2
1 1.000 0.080 8 127075659 intron variant T/C snv 0.72 0.700 1.000 1 2007 2007
dbSNP: rs6993569
rs6993569
PCAT1
1 1.000 0.080 8 127071852 intron variant G/A snv 0.19 0.700 1.000 1 2007 2007
dbSNP: rs6994316
rs6994316
PCAT1 ; PCAT2
1 1.000 0.080 8 127072294 intron variant G/A snv 0.77 0.700 1.000 1 2007 2007
dbSNP: rs7816535
rs7816535
PCAT1 ; CASC19
1 1.000 0.080 8 127125423 intron variant G/A snv 0.16 0.700 1.000 1 2007 2007
dbSNP: rs7825414
rs7825414
PCAT1
1 1.000 0.080 8 127069276 intron variant A/G snv 0.36 0.700 1.000 1 2007 2007
dbSNP: rs6983561
rs6983561
PCAT1 ; CASC19
3 0.925 0.080 8 127094635 intron variant A/C snv 0.17 0.780 1.000 10 2008 2017
dbSNP: rs13254738
rs13254738
PCAT1 ; PRNCR1 ; CASC19
8 0.807 0.160 8 127092098 non coding transcript exon variant C/A;T snv 0.720 0.667 3 2008 2012
dbSNP: rs13281615
rs13281615
POU5F1B ; CASC8 ; PCAT1 ; CASC21
18 0.716 0.360 8 127343372 intron variant A/G snv 0.43 0.020 1.000 2 2008 2009
dbSNP: rs16902094
rs16902094
CASC8 ; PCAT1 ; CASC21
3 0.882 0.160 8 127308101 intron variant A/G snv 0.15 0.720 1.000 3 2009 2017
dbSNP: rs620861
rs620861
POU5F1B ; CASC8 ; PCAT1 ; CASC21
3 0.925 0.080 8 127323428 intron variant G/A snv 0.36 0.030 0.667 3 2009 2017
dbSNP: rs445114
rs445114
CASC8 ; PCAT1 ; CASC21
3 0.882 0.160 8 127310936 intron variant T/A;C snv 0.700 1.000 2 2009 2011
dbSNP: rs1456315
rs1456315
PCAT1 ; PRNCR1 ; CASC19
9 0.790 0.200 8 127091692 non coding transcript exon variant T/A;C snv 0.720 1.000 4 2010 2014
dbSNP: rs12334903
rs12334903
PCAT1 ; LOC105375751
2 0.925 0.080 8 127038268 intron variant T/C snv 0.44 0.010 1.000 1 2010 2010
dbSNP: rs980171
rs980171
PCAT1 ; LOC105375751
2 0.925 0.080 8 127042277 intron variant A/G snv 0.45 0.010 1.000 1 2010 2010