Gene: PCAT1 ×
Source: ALL
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs6470494
rs6470494
PCAT1 ; CASC19 ; PCAT2
1 1.000 0.080 8 127075659 intron variant T/C snv 0.72 0.700 1.000 1 2007 2007
dbSNP: rs6993569
rs6993569
PCAT1
1 1.000 0.080 8 127071852 intron variant G/A snv 0.19 0.700 1.000 1 2007 2007
dbSNP: rs6994316
rs6994316
PCAT1 ; PCAT2
1 1.000 0.080 8 127072294 intron variant G/A snv 0.77 0.700 1.000 1 2007 2007
dbSNP: rs7014346
rs7014346
POU5F1B ; CASC8 ; PCAT1
14 0.732 0.240 8 127412547 intron variant A/G snv 0.63 0.010 1.000 1 2015 2015
dbSNP: rs72725854
rs72725854
PCAT1
2 0.925 0.080 8 127062570 intron variant A/G;T snv 0.710 1.000 1 2018 2018
dbSNP: rs75777376
rs75777376
PCAT1 ; LOC105375751 ; LOC105375753
1 1.000 0.080 8 126783938 intron variant T/C snv 4.0E-03 0.700 1.000 1 2019 2019
dbSNP: rs76784613
rs76784613
PCAT1 ; CASC19 ; LOC105375752
1 1.000 0.080 8 127164718 intron variant A/G snv 1.2E-02 0.700 1.000 1 2018 2018
dbSNP: rs7816535
rs7816535
PCAT1 ; CASC19
1 1.000 0.080 8 127125423 intron variant G/A snv 0.16 0.700 1.000 1 2007 2007
dbSNP: rs7824364
rs7824364
PCAT1 ; CASC19
2 0.925 0.080 8 127123120 intron variant T/C snv 7.9E-02 0.010 1.000 1 2017 2017
dbSNP: rs7825414
rs7825414
PCAT1
1 1.000 0.080 8 127069276 intron variant A/G snv 0.36 0.700 1.000 1 2007 2007
dbSNP: rs980171
rs980171
PCAT1 ; LOC105375751
2 0.925 0.080 8 127042277 intron variant A/G snv 0.45 0.010 1.000 1 2010 2010
dbSNP: rs6983267
rs6983267
POU5F1B ; CASC8 ; PCAT1 ; CCAT2
62 0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37 0.800 0.871 31 2007 2019
dbSNP: rs1016343
rs1016343
PCAT1 ; PRNCR1 ; CASC19 ; PCAT2
8 0.807 0.240 8 127081052 non coding transcript exon variant C/T snv 0.20 0.700 1.000 4 2007 2015
dbSNP: rs1456315
rs1456315
PCAT1 ; PRNCR1 ; CASC19
9 0.790 0.200 8 127091692 non coding transcript exon variant T/A;C snv 0.720 1.000 4 2010 2014
dbSNP: rs13254738
rs13254738
PCAT1 ; PRNCR1 ; CASC19
8 0.807 0.160 8 127092098 non coding transcript exon variant C/A;T snv 0.720 0.667 3 2008 2012
dbSNP: rs188140481
rs188140481
PCAT1 ; CASC19
4 0.925 0.080 8 127179427 non coding transcript exon variant T/A;C snv 0.720 1.000 3 2012 2015
dbSNP: rs1016342
rs1016342
PCAT1 ; PRNCR1 ; CASC19 ; PCAT2
1 1.000 0.080 8 127080210 non coding transcript exon variant C/G;T snv 0.700 1.000 1 2007 2007
dbSNP: rs1031588
rs1031588
PCAT1 ; PRNCR1 ; CASC19 ; PCAT2
1 1.000 0.080 8 127081032 non coding transcript exon variant C/A snv 0.24 0.700 1.000 1 2007 2007
dbSNP: rs1551510
rs1551510
PCAT1 ; PRNCR1 ; CASC19 ; PCAT2
1 1.000 0.080 8 127081233 non coding transcript exon variant C/T snv 0.56 0.700 1.000 1 2007 2007
dbSNP: rs16901946
rs16901946
PCAT1 ; PRNCR1 ; CASC19
8 0.827 0.160 8 127088680 non coding transcript exon variant A/G snv 1.7E-02 0.010 1.000 1 2018 2018
dbSNP: rs183373024
rs183373024
PCAT1 ; PRNCR1 ; CASC19
1 1.000 0.080 8 127091872 non coding transcript exon variant A/G snv 4.5E-03 0.700 1.000 1 2018 2018
dbSNP: rs378854
rs378854
CASC8 ; PCAT1 ; CASC21
2 0.925 0.080 8 127311574 non coding transcript exon variant C/T snv 0.31 0.010 1.000 1 2011 2011
dbSNP: rs4506170
rs4506170
CASC8 ; PCAT1 ; CASC21
1 1.000 0.080 8 127311646 non coding transcript exon variant T/C snv 0.15 0.700 1.000 1 2016 2016
dbSNP: rs72725879
rs72725879
PCAT1 ; PRNCR1 ; CASC19
1 1.000 0.080 8 127091724 non coding transcript exon variant C/T snv 0.26 0.700 1.000 1 2015 2015
dbSNP: rs7463708
rs7463708
PCAT1 ; PRNCR1 ; CASC19
7 0.807 0.120 8 127091810 non coding transcript exon variant G/T snv 0.27 0.010 1.000 1 2011 2011