Disease: Secondary malignant neoplasm of lymph node
Source: BEFREE ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10754339
VTCN1
0.882 0.120 1 117147650 3 prime UTR variant G/A snv 0.88 0.76 3
rs1256054
ESR2
0.882 0.120 14 64249595 synonymous variant G/C snv 2.8E-03 9.6E-04 3
rs1455751791
ESR1
0.882 0.120 6 152011735 synonymous variant C/G snv 4.0E-06 3
rs17530068
LOC105377871
0.882 0.120 6 81483392 intergenic variant T/C snv 0.19 3
rs2105269
GALNT16
0.882 0.120 14 69280517 intron variant A/G snv 0.35 4
rs2228468
ACKR2 ; KRBOX1 ; CYP8B1
0.882 0.120 3 42865620 missense variant A/C;T snv 0.43; 8.3E-03 3
rs2881766
ESR1
0.882 0.120 6 151797984 intron variant T/G snv 0.35 5
rs3218038
CCNE1
0.882 0.120 19 29814988 intron variant G/T snv 9.1E-02 4
rs3760468
NME1-NME2 ; NME1
0.882 0.120 17 51153130 upstream gene variant A/T snv 0.39 3
rs3801004
FSCN1
0.882 0.120 7 5598591 intron variant C/A;G;T snv 3
rs438034
CENPF
0.882 0.120 1 214657274 stop gained A/G;T snv 0.61 4
rs6990097
TNKS
0.882 0.120 8 9555347 non coding transcript exon variant T/C snv 0.28 3
rs746429
SIPA1
0.882 0.120 11 65649963 synonymous variant G/A snv 0.31 0.30 8
rs10053538
HAVCR2
0.807 0.160 5 157110499 intron variant C/A;T snv 7
rs4784227
CASC16
0.807 0.160 16 52565276 intron variant C/T snv 0.20 6
rs6024836
FAM210B ; AURKA
0.851 0.160 20 56369012 downstream gene variant G/A snv 0.42 6
rs7963551
RAD52
0.807 0.160 12 912349 3 prime UTR variant T/G snv 0.13 7
rs931127
SIPA1 ; PCNX3
0.790 0.160 11 65637829 upstream gene variant G/A snv 0.49 12
rs16949649
NME1 ; NME1-NME2
0.776 0.200 17 51152947 upstream gene variant T/C snv 0.39 12
rs3020449
ESR2
0.807 0.200 14 64306674 intron variant A/G;T snv 10
rs6762208
SENP2
0.851 0.200 3 185613377 missense variant C/A;T snv 0.36; 1.2E-05 3
rs11730582
SPP1
0.807 0.240 4 87975269 non coding transcript exon variant T/C snv 0.37 10
rs12075
CADM3-AS1 ; ACKR1
0.724 0.240 1 159205564 missense variant G/A snv 0.51 0.66 14
rs2302254
NME1-NME2 ; NME1
0.752 0.240 17 51153539 5 prime UTR variant C/T snv 0.22 15
rs2976392
JRK ; PSCA
0.724 0.240 8 142681514 3 prime UTR variant G/A snv 0.46 0.45 15