Disease: Secondary malignant neoplasm of lymph node
Source: BEFREE ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10053538
HAVCR2
0.807 0.160 5 157110499 intron variant C/A;T snv 7
rs1042522
TP53
0.426 0.800 17 7676154 missense variant G/C;T snv 0.67 242
rs1057519847
EGFR
0.570 0.560 7 55191821 missense variant CT/AG mnv 72
rs1057519848
EGFR
0.570 0.560 7 55191822 missense variant TG/GT mnv 72
rs11225395
MMP8
0.776 0.360 11 102725749 intron variant A/C;G snv 11
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 213
rs113488022
BRAF
0.351 0.840 7 140753336 missense variant A/C;G;T snv 4.0E-06 484
rs121434568
EGFR
0.568 0.560 7 55191822 missense variant T/A;G snv 73
rs121913377
BRAF
0.354 0.840 7 140753335 missense variant CA/AT;TT mnv 480
rs121913529
KRAS
0.492 0.680 12 25245350 missense variant C/A;G;T snv 4.0E-06 135
rs1219648
FGFR2
0.716 0.320 10 121586676 intron variant A/G;T snv 16
rs13181
KLC3 ; ERCC2
0.487 0.760 19 45351661 stop gained T/A;G snv 4.0E-06; 0.32 134
rs1455751791
ESR1
0.882 0.120 6 152011735 synonymous variant C/G snv 4.0E-06 3
rs1799983
NOS3
0.430 0.880 7 150999023 missense variant T/A;G snv 0.75 246
rs1800470
TGFB1
0.515 0.840 19 41353016 missense variant G/A;C snv 0.55; 2.4E-04 106
rs1800624
PBX2 ; AGER
0.658 0.480 6 32184610 upstream gene variant A/G;T snv 33
rs2228468
ACKR2 ; KRBOX1 ; CYP8B1
0.882 0.120 3 42865620 missense variant A/C;T snv 0.43; 8.3E-03 3
rs2231142
ABCG2
0.583 0.680 4 88131171 missense variant G/C;T snv 4.0E-06; 0.12 54
rs2249825
HMGB1
0.695 0.440 13 30463766 5 prime UTR variant G/A;C;T snv 22
rs2839698
MRPL23 ; MIR675 ; H19
0.662 0.520 11 1997623 non coding transcript exon variant G/A snv 0.41 25
rs3020449
ESR2
0.807 0.200 14 64306674 intron variant A/G;T snv 10
rs372043866
ERBB2
0.732 0.240 17 39727965 missense variant G/A;C;T snv 3.2E-05; 2.4E-05; 1.2E-05 18
rs3741219
MRPL23 ; H19 ; HOTS
0.776 0.280 11 1995389 non coding transcript exon variant A/G snv 0.42 10
rs3801004
FSCN1
0.882 0.120 7 5598591 intron variant C/A;G;T snv 3
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306