DisGeNET - a database of gene-disease associations

List of shared variants

Breast Carcinoma, C0678222

Disease: Secondary malignant neoplasm of lymph node

Source: BEFREE ×

Results per page

Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs13293512		0.763	0.360	9	94167461	intron variant	T/C	snv		0.24	11
rs2231142	ABCG2	0.583	0.680	4	88131171	missense variant	G/C;T	snv	4.0E-06; 0.12		54
rs2228468	ACKR2 ; KRBOX1 ; CYP8B1	0.882	0.120	3	42865620	missense variant	A/C;T	snv	0.43; 8.3E-03		3
rs17655	BIVM-ERCC5 ; ERCC5	0.597	0.560	13	102875652	missense variant	G/C	snv	0.28	0.30	52
rs113488022	BRAF	0.351	0.840	7	140753336	missense variant	A/C;G;T	snv	4.0E-06		484
rs121913377	BRAF	0.354	0.840	7	140753335	missense variant	CA/AT;TT	mnv			480
rs12075	CADM3-AS1 ; ACKR1	0.724	0.240	1	159205564	missense variant	G/A	snv	0.51	0.66	14
rs4784227	CASC16	0.807	0.160	16	52565276	intron variant	C/T	snv		0.20	6
rs10505477	CASC8 ; PCAT1 ; POU5F1B	0.658	0.400	8	127395198	intron variant	A/G	snv		0.40	19
rs3218038	CCNE1	0.882	0.120	19	29814988	intron variant	G/T	snv		9.1E-02	4
rs187115	CD44	0.695	0.320	11	35154612	intron variant	T/C	snv		0.37	22
rs438034	CENPF	0.882	0.120	1	214657274	stop gained	A/G;T	snv	0.61		4
rs1205	CRP	0.602	0.680	1	159712443	3 prime UTR variant	C/T	snv		0.30	45
rs781172058	CXCR4	0.732	0.320	2	136115340	synonymous variant	C/T	snv	4.0E-06		16
rs1057519847	EGFR	0.570	0.560	7	55191821	missense variant	CT/AG	mnv			72
rs1057519848	EGFR	0.570	0.560	7	55191822	missense variant	TG/GT	mnv			72
rs121434568	EGFR	0.568	0.560	7	55191822	missense variant	T/A;G	snv			73
rs121434569	EGFR-AS1 ; EGFR	0.581	0.520	7	55181378	missense variant	C/T	snv	2.8E-05	5.6E-05	70
rs1051740	EPHX1	0.592	0.760	1	225831932	missense variant	T/C	snv	0.32	0.27	56
rs372043866	ERBB2	0.732	0.240	17	39727965	missense variant	G/A;C;T	snv	3.2E-05; 2.4E-05; 1.2E-05		18
rs11615	ERCC1	0.572	0.640	19	45420395	synonymous variant	A/G	snv	0.50	0.55	62
rs1455751791	ESR1	0.882	0.120	6	152011735	synonymous variant	C/G	snv	4.0E-06		3
rs2881766	ESR1	0.882	0.120	6	151797984	intron variant	T/G	snv		0.35	5
rs1256054	ESR2	0.882	0.120	14	64249595	synonymous variant	G/C	snv	2.8E-03	9.6E-04	3
rs3020449	ESR2	0.807	0.200	14	64306674	intron variant	A/G;T	snv			10