Source: GWASDB

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs2596542
rs2596542
MICA ; MICA-AS1
0.724 0.200 6 31398818 upstream gene variant C/T snv 0.41
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.700 1.000 1 2009 2009
dbSNP: rs8321
rs8321
ZNRD1
0.742 0.320 6 30064745 3 prime UTR variant A/C snv 5.4E-02 5.9E-02
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.700 1.000 1 2009 2009
dbSNP: rs9264942
rs9264942
HLA-B ; LOC112267902
0.763 0.400 6 31306603 intron variant T/C snv 0.34
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.800 1.000 2 2009 2010
dbSNP: rs12153855
rs12153855
TNXB
0.776 0.320 6 32107027 intron variant T/C snv 0.11
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.700 1.000 2 2009 2010
dbSNP: rs2395029
rs2395029
HCP5
0.790 0.320 6 31464003 non coding transcript exon variant T/G snv 2.7E-02 2.4E-02
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.800 1.000 2 2009 2010
dbSNP: rs10484554
rs10484554
HLA-B ; LOC112267902
0.807 0.200 6 31306778 intron variant C/T snv 0.12
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.700 1.000 2 2009 2010
dbSNP: rs13199524
rs13199524
TNXB
0.807 0.240 6 32098988 intron variant C/T snv 8.4E-02
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.700 1.000 2 2009 2010
dbSNP: rs2248462
rs2248462 		0.807 0.240 6 31479019 downstream gene variant G/A snv 0.19
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.700 1.000 1 2009 2009
dbSNP: rs2269426
rs2269426
TNXB
0.807 0.280 6 32108722 intron variant G/A snv 0.35
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.700 1.000 1 2010 2010
dbSNP: rs2844511
rs2844511 		0.807 0.200 6 31422007 intron variant A/G;T snv
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.700 1.000 1 2009 2009
dbSNP: rs3130380
rs3130380
HCG18 ; HCG17
0.807 0.280 6 30311353 intron variant G/A snv 6.6E-02
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.700 1.000 1 2009 2009
dbSNP: rs9261290
rs9261290
RNF39
0.807 0.280 6 30070870 3 prime UTR variant T/C;G snv 5.2E-02; 7.2E-06
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.700 1.000 1 2009 2009
dbSNP: rs12198173
rs12198173
TNXB
0.827 0.240 6 32059031 intron variant G/A snv 0.10
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.700 1.000 1 2010 2010
dbSNP: rs241447
rs241447
TAP2
0.827 0.280 6 32828974 missense variant T/C snv 0.31 0.26
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.700 1.000 1 2009 2009
dbSNP: rs2516400
rs2516400 		0.827 0.320 6 31513328 upstream gene variant G/A snv 0.32
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.700 1.000 1 2009 2009
dbSNP: rs2516448
rs2516448 		0.827 0.120 6 31422633 intron variant T/C;G snv
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.700 1.000 1 2009 2009
dbSNP: rs3130542
rs3130542 		0.827 0.160 6 31264334 downstream gene variant A/G snv 0.81
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.700 1.000 1 2009 2009
dbSNP: rs5010528
rs5010528
HLA-B ; HLA-C
0.827 0.240 6 31273255 intron variant A/G snv 0.15
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.700 1.000 1 2010 2010
dbSNP: rs12191877
rs12191877
HLA-B
0.851 0.120 6 31285148 intron variant C/T snv 0.12
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.700 1.000 2 2009 2010
dbSNP: rs3093662
rs3093662
TNF
0.851 0.200 6 31576412 intron variant A/G snv 7.1E-02
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.700 1.000 2 2009 2010
dbSNP: rs3815087
rs3815087
PSORS1C1
0.851 0.200 6 31125810 5 prime UTR variant G/A snv 0.25
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.800 1.000 2 2009 2010
dbSNP: rs6457374
rs6457374
HLA-B ; LOC112267902
0.851 0.200 6 31304484 intron variant C/T snv 0.81
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.700 1.000 2 2009 2010
dbSNP: rs9368699
rs9368699
SNORD48 ; SNHG32
0.851 0.200 6 31834764 non coding transcript exon variant T/C snv 3.2E-02
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.800 1.000 2 2009 2010
dbSNP: rs12663103
rs12663103
GPSM3
0.851 0.240 6 32193547 intron variant T/C snv 6.1E-02
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.700 1.000 1 2010 2010
dbSNP: rs185819
rs185819
TNXB
0.851 0.200 6 32082290 missense variant T/A;C;G snv 8.2E-06; 0.58; 4.1E-06
CUI: C1836231
Disease: HIV-1, RESISTANCE TO
HIV-1, RESISTANCE TO 		0.700 1.000 1 2010 2010