Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 57216
Gene Symbol: VANGL2
VANGL2
0.350 GeneticVariation disease BEFREE Protein tyrosine kinase 7 (Ptk7) was shown to cause a very severe form of NTDs called craniorachischisis in a mouse model and genetically interacts with a core PCP member Vangl2 where double heterozygotes suffer from spina bifida. 26368655 2015
Entrez Id: 57216
Gene Symbol: VANGL2
VANGL2
0.350 GeneticVariation disease BEFREE In mice, homozygosity for mutations in the Vangl1 and Vangl2 genes or combined heterozygosity for Vangl1/Vangl2 mutations causes the very severe neural tube defect (NTD) craniorachischisis. 25068569 2014
Entrez Id: 57216
Gene Symbol: VANGL2
VANGL2
0.350 Biomarker disease BEFREE This could be mediated via heparan sulfate residues, as Vangl2(Lp/+) embryos fail to initiate neural tube closure and develop craniorachischisis (usually seen only in Vangl2(Lp/Lp)) when cultured in the presence of chlorate, a sulfation inhibitor. 23760952 2013
Entrez Id: 57216
Gene Symbol: VANGL2
VANGL2
0.350 GeneticVariation disease BEFREE Mouse models indicate that the homozygous disruption of Sec24b, which mediates the ER-to-Golgi transportation of the core PCP gene Vangl2 as a component of the COPII vesicle, will result in craniorachischisis. 23592378 2013
Entrez Id: 57216
Gene Symbol: VANGL2
VANGL2
0.350 GeneticVariation disease BEFREE The Loop-tail (Lp) mouse that develops craniorachischisis carry missense mutations in the PCP core gene Vangl2, that is the mammalian homolog of the Drosophila Strabismus/Van gogh (Stbm/Vang). 21674647 2012
Entrez Id: 57216
Gene Symbol: VANGL2
VANGL2
0.350 Biomarker disease CTD_human Cranial effects of retinoic acid in the loop-tail (Lp) mutant mouse. 2373757 1990
Entrez Id: 81839
Gene Symbol: VANGL1
VANGL1
0.310 GeneticVariation disease BEFREE In mice, homozygosity for mutations in the Vangl1 and Vangl2 genes or combined heterozygosity for Vangl1/Vangl2 mutations causes the very severe neural tube defect (NTD) craniorachischisis. 25068569 2014
Entrez Id: 81839
Gene Symbol: VANGL1
VANGL1
0.310 Biomarker disease CTD_human Novel mutations in VANGL1 in neural tube defects. 19319979 2009
Entrez Id: 81839
Gene Symbol: VANGL1
VANGL1
0.310 Biomarker disease CTD_human Mutations in VANGL1 associated with neural-tube defects. 17409324 2007
Entrez Id: 5652
Gene Symbol: PRSS8
PRSS8
0.300 Therapeutic disease CTD_human Functional analysis of a missense mutation in the serine protease inhibitor SPINT2 associated with congenital sodium diarrhea. 24722141 2014
Entrez Id: 10653
Gene Symbol: SPINT2
SPINT2
0.300 Biomarker disease CTD_human Functional analysis of a missense mutation in the serine protease inhibitor SPINT2 associated with congenital sodium diarrhea. 24722141 2014
Entrez Id: 4524
Gene Symbol: MTHFR
MTHFR
0.300 Biomarker disease CTD_human Association of the maternal MTHFR C677T polymorphism with susceptibility to neural tube defects in offsprings: evidence from 25 case-control studies. 23056169 2012
Entrez Id: 51339
Gene Symbol: DACT1
DACT1
0.300 GermlineCausalMutation disease ORPHANET Identification of novel rare mutations of DACT1 in human neural tube defects. 22610794 2012
Entrez Id: 1544
Gene Symbol: CYP1A2
CYP1A2
0.300 Biomarker disease CTD_human Caffeine, selected metabolic gene variants, and risk for neural tube defects. 20641098 2010
Entrez Id: 10
Gene Symbol: NAT2
NAT2
0.300 Biomarker disease CTD_human Caffeine, selected metabolic gene variants, and risk for neural tube defects. 20641098 2010
Entrez Id: 3630
Gene Symbol: INS
INS
0.300 Therapeutic disease CTD_human Arsenate-induced maternal glucose intolerance and neural tube defects in a mouse model. 19446573 2009
Entrez Id: 4886
Gene Symbol: NPY1R
NPY1R
0.300 Biomarker disease CTD_human Gastrointestinal hormones (anorexigenic peptide YY and orexigenic ghrelin) influence neural tube development. 17400914 2007
Entrez Id: 5697
Gene Symbol: PYY
PYY
0.300 Biomarker disease CTD_human Gastrointestinal hormones (anorexigenic peptide YY and orexigenic ghrelin) influence neural tube development. 17400914 2007
Entrez Id: 51738
Gene Symbol: GHRL
GHRL
0.300 Therapeutic disease CTD_human Gastrointestinal hormones (anorexigenic peptide YY and orexigenic ghrelin) influence neural tube development. 17400914 2007
Entrez Id: 4522
Gene Symbol: MTHFD1
MTHFD1
0.300 Biomarker disease CTD_human Confirmation of the R653Q polymorphism of the trifunctional C1-synthase enzyme as a maternal risk for neural tube defects in the Irish population. 16552426 2006
Entrez Id: 1437
Gene Symbol: CSF2
CSF2
0.300 Therapeutic disease CTD_human Valproic acid-induced fetal malformations are reduced by maternal immune stimulation with granulocyte-macrophage colony-stimulating factor or interferon-gamma. 17075842 2006
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.300 Therapeutic disease CTD_human Valproic acid-induced fetal malformations are reduced by maternal immune stimulation with granulocyte-macrophage colony-stimulating factor or interferon-gamma. 17075842 2006
Entrez Id: 635
Gene Symbol: BHMT
BHMT
0.300 Biomarker disease CTD_human Neural tube defects and folate pathway genes: family-based association tests of gene-gene and gene-environment interactions. 17035141 2006
Entrez Id: 27443
Gene Symbol: CECR2
CECR2
0.300 Biomarker disease CTD_human CECR2, a protein involved in neurulation, forms a novel chromatin remodeling complex with SNF2L. 15640247 2005
Entrez Id: 2737
Gene Symbol: GLI3
GLI3
0.300 Biomarker disease CTD_human Exencephaly induction by valproic acid in the genetic polydactyly/arhinencephaly mouse, Pdn/Pdn. 16359493 2005