Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5048
Gene Symbol: PAFAH1B1
PAFAH1B1
0.080 GeneticVariation group BEFREE The location and type of mutation predict malformation severity in isolated lissencephaly caused by abnormalities within the LIS1 gene. 11115846 2000
Entrez Id: 5172
Gene Symbol: SLC26A4
SLC26A4
0.050 Biomarker group BEFREE The finding of a single heterozygous mutation at the PDS gene in a further eight was strongly suggestive of a critical role for pendrin, the protein product of the PDS gene, in the generation of enlarged vestibular aqueducts in at least 86% (49/57 cases) of patients with this radiological malformation. 10700480 2000
Entrez Id: 5076
Gene Symbol: PAX2
PAX2
0.040 GeneticVariation group BEFREE No significant linkage was found to 6p, where a renal and ureteric malformation locus has been reported, or to PAX2, mutations of which cause VUR in renal-coloboma syndrome. 10739767 2000
Entrez Id: 6910
Gene Symbol: TBX5
TBX5
0.040 GeneticVariation group BEFREE Mutations in the TBX5 transcription factor gene cause human cardiac malformation in Holt-Oram syndrome. 10974675 2000
Entrez Id: 3239
Gene Symbol: HOXD13
HOXD13
0.040 Biomarker group BEFREE Synpolydactyly (SPD) is a rare malformation of the distal limbs known to be caused by mutations in HOXD13. 10951517 2000
Entrez Id: 7546
Gene Symbol: ZIC2
ZIC2
0.020 GeneticVariation group BEFREE Mutation in human ZIC2, a zinc finger protein homologous to Drosophila odd-paired, causes holoprosencephaly (HPE), which is a common, severe malformation of the brain in humans. 10677508 2000
Entrez Id: 5730
Gene Symbol: PTGDS
PTGDS
0.010 GeneticVariation group BEFREE The finding of a single heterozygous mutation at the PDS gene in a further eight was strongly suggestive of a critical role for pendrin, the protein product of the PDS gene, in the generation of enlarged vestibular aqueducts in at least 86% (49/57 cases) of patients with this radiological malformation. 10700480 2000
Entrez Id: 285
Gene Symbol: ANGPT2
ANGPT2
0.010 AlteredExpression group BEFREE As Tie-2((-/-)) mice exhibit growth retardation and vascular network malformation, the expression of Tie-2 and its ligands, angiopoietin-1 (Ang-1) and angiopoietin-2 (Ang-2), were investigated in human placenta from normal pregnancies and those complicated by severe IUGR. 10854239 2000
Entrez Id: 9510
Gene Symbol: ADAMTS1
ADAMTS1
0.010 Biomarker group BEFREE Targeted disruption of the mouse ADAMTS-1 gene resulted in growth retardation with adipose tissue malformation. 10811842 2000
Entrez Id: 9618
Gene Symbol: TRAF4
TRAF4
0.010 Biomarker group BEFREE TRAF4 deficiency leads to tracheal malformation with resulting alterations in air flow to the lungs. 10934170 2000
Entrez Id: 7010
Gene Symbol: TEK
TEK
0.010 Biomarker group BEFREE As Tie-2((-/-)) mice exhibit growth retardation and vascular network malformation, the expression of Tie-2 and its ligands, angiopoietin-1 (Ang-1) and angiopoietin-2 (Ang-2), were investigated in human placenta from normal pregnancies and those complicated by severe IUGR. 10854239 2000
Entrez Id: 1717
Gene Symbol: DHCR7
DHCR7
0.100 Biomarker group BEFREE Smith-Lemli-Opitz syndrome (SLOS) is an inherited multiple malformation syndrome caused by enzymatic deficiency of 3beta-hydroxysterol-Delta(7)-reductase (DHCR7). 11503168 2001
Entrez Id: 5048
Gene Symbol: PAFAH1B1
PAFAH1B1
0.080 GeneticVariation group BEFREE Most patients with lissencephaly secondary to LIS1 mutations have a severe malformation consisting of generalized agyria and pachygyria. 11502906 2001
Entrez Id: 5080
Gene Symbol: PAX6
PAX6
0.070 Biomarker group BEFREE PAX6 haploinsufficiency causes cerebral malformation and olfactory dysfunction in humans. 11431688 2001
Entrez Id: 170474
Gene Symbol: HFM
HFM
0.030 Biomarker group BEFREE Hemifacial microsomia: progress in understanding the genetic basis of a complex malformation syndrome. 11810276 2001
Entrez Id: 7546
Gene Symbol: ZIC2
ZIC2
0.020 GeneticVariation group BEFREE In previous studies, we showed that the homozygous Zic1 null mutation (Zic1-/-) results in cerebellar malformation with severe ataxia and that holoprosencephaly and spina bifida occur in homozygotes for Zic2 knockdown mutation (Zic2kd/kd). 11699604 2001
Entrez Id: 7490
Gene Symbol: WT1
WT1
0.020 GeneticVariation group BEFREE We describe here a novel WT1 gene mutation, i.e. a point mutation at intron 7 (+2) in both the tumor and the germline cells of a patient with Wilms' tumor and congenital male genitourinary malformation, but without renal disorder. 11518820 2001
Entrez Id: 51227
Gene Symbol: PIGP
PIGP
0.010 Biomarker group BEFREE To our best knowledge, no other gene in DSCR is reported to be expressed in tongue, so that DSCR5 may be the first candidate to elucidate the pathophysiology of tongue malformation observed in DS. 11331941 2001
Entrez Id: 80199
Gene Symbol: FUZ
FUZ
0.010 GeneticVariation group BEFREE The most recent development in NTD research for disease-causing genes is the discovery of a genetic link to the most well-known environmental cause of neural tube malformation, folate deficiency in pregnant women. 11147289 2001
Entrez Id: 55349
Gene Symbol: CHDH
CHDH
0.010 Biomarker group BEFREE The studies summarized demonstrate that CHD is a common, major malformation. 11265502 2001
Entrez Id: 7545
Gene Symbol: ZIC1
ZIC1
0.010 GeneticVariation group BEFREE In previous studies, we showed that the homozygous Zic1 null mutation (Zic1-/-) results in cerebellar malformation with severe ataxia and that holoprosencephaly and spina bifida occur in homozygotes for Zic2 knockdown mutation (Zic2kd/kd). 11699604 2001
Entrez Id: 2688
Gene Symbol: GH1
GH1
0.020 GeneticVariation group BEFREE This study shows for the first time that MRI pituitary morphology may correlate with the etiology of severe IGHD: normal morphology suggests the presence of GH-1 gene mutations, while severe hypoplasia with malformation have other causes which might include so far unknown genetic defects as well as traumatic insults. 12457450 2002
Entrez Id: 10970
Gene Symbol: CKAP4
CKAP4
0.020 GeneticVariation group BEFREE These results confirm that ADULT syndrome is a clinically as well as molecularly distinct member of the expanding p63 mutation family of human malformation syndromes. 11929852 2002
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.020 GeneticVariation group BEFREE This malformation was visibly more severe than previously described in females with RS and another male with an MECP2 mutation. 11930274 2002
Entrez Id: 6121
Gene Symbol: RPE65
RPE65
0.020 GeneticVariation group BEFREE These results confirm that ADULT syndrome is a clinically as well as molecularly distinct member of the expanding p63 mutation family of human malformation syndromes. 11929852 2002