Source: ALL
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs1800896
rs1800896
IL10 ; IL19
113 0.507 0.800 1 206773552 intron variant T/C snv 0.41 0.020 1.000 2 2015 2016
dbSNP: rs35761398
rs35761398
CNR2
19 0.701 0.520 1 23875429 missense variant TT/CC mnv 0.010 1.000 1 2015 2015
dbSNP: rs1799945
rs1799945
HFE ; LOC108783645
226 0.452 0.760 6 26090951 missense variant C/G;T snv 0.11 0.10 0.010 1.000 1 2005 2005
dbSNP: rs1800562
rs1800562
HFE ; LOC108783645
262 0.435 0.880 6 26092913 missense variant G/A snv 3.3E-02 3.8E-02 0.010 1.000 1 2005 2005
dbSNP: rs1419881
rs1419881
TCF19
4 0.851 0.280 6 31162816 3 prime UTR variant G/A snv 0.50 0.700 1.000 1 2015 2015
dbSNP: rs3130542
rs3130542 		8 0.827 0.160 6 31264334 downstream gene variant A/G snv 0.81 0.700 1.000 1 2015 2015
dbSNP: rs2853953
rs2853953 		1 1.000 0.080 6 31267728 downstream gene variant G/A snv 0.20 0.700 1.000 1 2015 2015
dbSNP: rs2596542
rs2596542
MICA ; MICA-AS1
18 0.724 0.200 6 31398818 upstream gene variant C/T snv 0.41 0.010 1.000 1 2013 2013
dbSNP: rs1800630
rs1800630
LTA ; TNF ; LOC100287329
17 0.701 0.480 6 31574699 upstream gene variant C/A snv 0.14 0.010 1.000 1 2017 2017
dbSNP: rs1799724
rs1799724
LTA ; TNF
47 0.600 0.680 6 31574705 upstream gene variant C/T snv 8.5E-02 0.010 1.000 1 2017 2017
dbSNP: rs1800750
rs1800750
TNF
5 0.827 0.280 6 31575186 upstream gene variant G/A snv 1.6E-02 0.010 1.000 1 2017 2017
dbSNP: rs1800629
rs1800629
TNF
169 0.472 0.920 6 31575254 upstream gene variant G/A snv 0.12 0.14 0.010 1.000 1 2017 2017
dbSNP: rs1800610
rs1800610
TNF
7 0.807 0.320 6 31576050 intron variant G/A snv 8.4E-02 0.010 1.000 1 2017 2017
dbSNP: rs652888
rs652888
CYP21A2 ; EHMT2 ; EHMT2-AS1 ; LOC107986588
10 0.776 0.480 6 31883457 non coding transcript exon variant A/G snv 0.18 0.20 0.700 1.000 1 2015 2015
dbSNP: rs12614
rs12614
CFB ; CYP21A2
5 0.851 0.160 6 31946402 missense variant C/G;T snv 4.1E-06; 0.12 0.700 1.000 1 2015 2015
dbSNP: rs12252
rs12252
IFITM3
23 0.695 0.240 11 320772 splice region variant A/G snv 0.13 0.13 0.010 1.000 1 2019 2019
dbSNP: rs422951
rs422951
NOTCH4
8 0.807 0.280 6 32220606 missense variant T/C snv 0.40 0.40 0.700 1.000 1 2015 2015
dbSNP: rs9275319
rs9275319 		6 0.807 0.200 6 32698518 intergenic variant A/G snv 0.15 0.010 1.000 1 2014 2014
dbSNP: rs2856718
rs2856718 		8 0.790 0.360 6 32702478 downstream gene variant C/T snv 0.34 0.730 1.000 5 2013 2017
dbSNP: rs9275572
rs9275572 		15 0.724 0.360 6 32711222 upstream gene variant A/G;T snv 0.010 1.000 1 2014 2014
dbSNP: rs9276370
rs9276370
HLA-DQA2
3 0.882 0.200 6 32739518 upstream gene variant G/T snv 0.51 0.700 1.000 1 2014 2014
dbSNP: rs7756516
rs7756516
HLA-DQB2
4 0.851 0.280 6 32756140 3 prime UTR variant C/T snv 0.49 0.700 1.000 1 2014 2014
dbSNP: rs7453920
rs7453920
HLA-DQB2
10 0.752 0.440 6 32762235 intron variant A/G;T snv 0.720 1.000 5 2013 2017
dbSNP: rs378352
rs378352
HLA-DOA
2 0.925 0.200 6 33007157 synonymous variant G/A;C snv 0.20 0.700 1.000 1 2015 2015
dbSNP: rs3077
rs3077
HLA-DPA1
16 0.701 0.440 6 33065245 3 prime UTR variant A/G snv 0.29 0.760 1.000 8 2011 2017