Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1057519090
rs1057519090
A 0.700 CausalMutation CLINVAR

dbSNP: rs1057523354
rs1057523354
A 0.700 CausalMutation CLINVAR

dbSNP: rs28936375
rs28936375
A 0.700 CausalMutation CLINVAR

dbSNP: rs61752717
rs61752717
0.100 GeneticVariation BEFREE The M694V homozygous genotype was found to be associated with a higher prevalence of renal amyloidosis and arthritis, compared with other genotypes (P=.0002 and P=.006, respectively). 10364520

1999

dbSNP: rs61752717
rs61752717
0.100 GeneticVariation BEFREE The presence of a homozygous M694V mutation was significantly associated with a more severe form of the disease: the clinical onset of the disease manifested at an earlier age; the number of attacks per month was higher; the global assessment by the treating physician and the severity of pain scored higher; and arthritis was more frequent. 10224214

1999

dbSNP: rs28940580
rs28940580
0.020 GeneticVariation BEFREE Arthritis frequency was found to be lower in the patients with homozygous Met680Ile mutation. 10662876

2000

dbSNP: rs1800562
rs1800562
0.080 GeneticVariation BEFREE The 124 C282Y homozygotes who filled out the written questionnaire and the 17 C282Y homozygotes who completed the physician double-blind interview reported no significantly higher rates of arthritis or joint pain, abdominal pain, arrhythmias, darkening of skin, or other symptoms traditionally associated with hemochromatosis compared with the 22,429 wild-type controls who filled out the written questionnaire and 29 wild-type controls who completed the double-blind interview. 12059121

2002

dbSNP: rs1800562
rs1800562
0.080 GeneticVariation BEFREE These data suggest that most of the C282Y homozygotes occurred in this arthritis group by chance and that their arthritis was incidental to their HFE genotype. 11886966

2002

dbSNP: rs1416580204
rs1416580204
MOK
0.010 GeneticVariation BEFREE RAGE and arthritis: the G82S polymorphism amplifies the inflammatory response. 12070776

2002

dbSNP: rs2070600
rs2070600
0.010 GeneticVariation BEFREE RAGE and arthritis: the G82S polymorphism amplifies the inflammatory response. 12070776

2002

dbSNP: rs61752717
rs61752717
0.100 GeneticVariation BEFREE Logistic regression analysis showed that homozygosity for the M694V allele (odds ratio [OR] 4.27, 95% confidence interval [95% CI] 2.01-9.07), the presence of the SAAalpha/alpha genotype (OR 2.99, 95% CI 1.47-6.09), the occurrence of arthritis attacks (OR 2.43, 95% CI 1.17-5.06), and male sex (OR 1.73, 95% CI 0.90-3.33) were significantly and independently associated with renal amyloidosis. 12687559

2003

dbSNP: rs61752717
rs61752717
0.100 GeneticVariation BEFREE Children homozygous for the M694V mutation presented at a younger age, had a higher severity score, and more commonly had arthritis. 12508410

2003

dbSNP: rs1061622
rs1061622
0.010 GeneticVariation BEFREE To assess the association between the tumour necrosis factor receptor 2 (TNFR2) 196 M/R single-nucleotide polymorphism and rheumatoid arthritis (RA) severity by taking advantage of the extremes of phenotype that exist in arthritis. 15252214

2004

dbSNP: rs1477353313
rs1477353313
ACR
0.010 GeneticVariation BEFREE To assess the association between the tumour necrosis factor receptor 2 (TNFR2) 196 M/R single-nucleotide polymorphism and rheumatoid arthritis (RA) severity by taking advantage of the extremes of phenotype that exist in arthritis. 15252214

2004

dbSNP: rs61752717
rs61752717
0.100 GeneticVariation BEFREE The homozygosity of M694V mutation in the MEFV gene is associated with arthritis in FMF patients. 14727057

2005

dbSNP: rs1800562
rs1800562
0.080 GeneticVariation BEFREE The observed C282Y allele frequency in rheumatic patients with undifferentiated arthritis was 12.9 and exceeded that of healthy subjects (p = 0.01). 15789881

2005

dbSNP: rs3743930
rs3743930
0.020 GeneticVariation BEFREE Although four of the 26 patients with E148Q/E148Q were asymptomatic at the time of evaluation, abdominal pain was seen in 77% of the patients, fever in 66%, arthralgia in 50%, arthritis in 15.4%, and vomiting in 23.8%. 15458961

2005

dbSNP: rs1800562
rs1800562
0.080 GeneticVariation BEFREE There was no association between the presence of HFE mutations and the prevalence of self-reported, doctor-diagnosed arthritis (C282Y/wild type (WT) adjusted OR = 1.041 (95% confidence interval (CI) 0.68-1.61), H63D/WT OR = 0.76 (95% CI 0.53-1.08), C282Y/C282Y OR = 0.39 (95% CI 0.04-3.63), C282Y/H 63D OR = 0.808 (95% CI 0.27-2.42), H63D/H63D OR = 0.419 (95% CI 0.13-1.36)). 16638105

2006

dbSNP: rs1799945
rs1799945
0.010 GeneticVariation BEFREE There was no association between the presence of HFE mutations and the prevalence of self-reported, doctor-diagnosed arthritis (C282Y/wild type (WT) adjusted OR = 1.041 (95% confidence interval (CI) 0.68-1.61), H63D/WT OR = 0.76 (95% CI 0.53-1.08), C282Y/C282Y OR = 0.39 (95% CI 0.04-3.63), C282Y/H 63D OR = 0.808 (95% CI 0.27-2.42), H63D/H63D OR = 0.419 (95% CI 0.13-1.36)). 16638105

2006

dbSNP: rs3789604
rs3789604
0.010 GeneticVariation BEFREE A total of 667 RA patients and 286 controls were genotyped for 13 PTPN22 single nucleotide polymorphisms (SNPs) by allele-specific kinetic polymerase chain reaction. rs3789604 was genotyped in an additional 410 RA and 270 UA patients participating in the Leiden early arthritis inception cohort. 17135225

2007

dbSNP: rs61752717
rs61752717
0.100 GeneticVariation BEFREE Arthralgia or arthritis was significantly higher in M694V carriers than in non-M694V carriers (p < 0.05). 18300119

2008

dbSNP: rs1800562
rs1800562
0.080 GeneticVariation BEFREE Hereditary hemochromatosis (HH) is a genetic disease associated with iron overload, in which individuals homozygous for the mutant C282Y HFE associated allele are at risk of developing liver disease, diabetes and arthritis. 17904763

2008

dbSNP: rs1800562
rs1800562
0.080 GeneticVariation BEFREE Male C282Y homozygotes with a serum ferritin level of 1000 mug per liter or more were more likely to report fatigue, use of arthritis medicine, and a history of liver disease than were men who had the wild-type gene. 18199861

2008

dbSNP: rs5743708
rs5743708
0.010 GeneticVariation BEFREE In contrast, compared with normal controls, one of the rare TLR-2 SNPs (rs5743708, R753Q) was associated with the development of arthritis and extraarticular features (P = 0.015 by chi-square test). 18975326

2008

dbSNP: rs1385889785
rs1385889785
0.010 GeneticVariation BEFREE We found that female sex, colonic involvement, and the AA genotype at -110 G>A were associated with increased risk of both subtypes of PA, although the association appears to be stronger for arthritis than for arthralgia. 19235910

2009