Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs10499194
rs10499194
0.010 GeneticVariation BEFREE However, no association was found for rs10499194 in a Swedish cohort with early arthritis. 19366996

2010

dbSNP: rs17197936
rs17197936
0.010 GeneticVariation BEFREE A harmful association was observed between the minor allele of rs17197936 and 2 clinical traits, count of joints with active arthritis and count of joints with pain on motion/tenderness, in patients with extended oligoarthritis. 25236364

2014

dbSNP: rs1477353313
rs1477353313
ACR
0.010 GeneticVariation BEFREE To assess the association between the tumour necrosis factor receptor 2 (TNFR2) 196 M/R single-nucleotide polymorphism and rheumatoid arthritis (RA) severity by taking advantage of the extremes of phenotype that exist in arthritis. 15252214

2004

dbSNP: rs2070600
rs2070600
0.010 GeneticVariation BEFREE RAGE and arthritis: the G82S polymorphism amplifies the inflammatory response. 12070776

2002

dbSNP: rs7033979
rs7033979
0.010 GeneticVariation BEFREE The two arthritis-susceptible candidate SNPs, rs7775 (p.Arg324Gly) in the FRZB gene and rs7033979 in the ASPN gene, showed associations with KBD (OR = 1.568, P = 4 × 10<sup>-3</sup> and OR = 0.744, P = 8 × 10<sup>-3</sup>, respectively). 28651521

2017

dbSNP: rs13277113
rs13277113
BLK
0.010 GeneticVariation BEFREE Polymorphisms of rs13277113 in NCF2 gene were associated with arthritis and autoantibody production, but not disease risk, of SLE in Chinese population. 20842512

2011

dbSNP: rs6074028
rs6074028
0.010 GeneticVariation BEFREE Haplotype 2 had a protective effect on LN (OR = 0.47, P = 0.01, Pcorr = 0.05) in the recessive model while rs73115010, rs6074028 and haplotype 3 (ACGTCGG) resulted in increased risk of arthritis in the recessive model (OR = 2.87, 2.76 and 2.46, P = 0.002, 0.004 and 0.01, Pcorr = 0.009, 0.02 and 0.05, respectively). 23256180

2013

dbSNP: rs73115010
rs73115010
0.010 GeneticVariation BEFREE Haplotype 2 had a protective effect on LN (OR = 0.47, P = 0.01, Pcorr = 0.05) in the recessive model while rs73115010, rs6074028 and haplotype 3 (ACGTCGG) resulted in increased risk of arthritis in the recessive model (OR = 2.87, 2.76 and 2.46, P = 0.002, 0.004 and 0.01, Pcorr = 0.009, 0.02 and 0.05, respectively). 23256180

2013

dbSNP: rs2501432
rs2501432
0.010 GeneticVariation BEFREE In humans, the nonsynonymous mutation Q63R, the most common variant of the CB2 receptor, has been found to be associated with multiple diseases, including idiopathic arthritis, obesity, and celiac diseases. 29694791

2018

dbSNP: rs35761398
rs35761398
0.010 GeneticVariation BEFREE In humans, the nonsynonymous mutation Q63R, the most common variant of the CB2 receptor, has been found to be associated with multiple diseases, including idiopathic arthritis, obesity, and celiac diseases. 29694791

2018

dbSNP: rs879761216
rs879761216
0.010 GeneticVariation BEFREE In humans, the nonsynonymous mutation Q63R, the most common variant of the CB2 receptor, has been found to be associated with multiple diseases, including idiopathic arthritis, obesity, and celiac diseases. 29694791

2018

dbSNP: rs1057523354
rs1057523354
A 0.700 CausalMutation CLINVAR

dbSNP: rs1057519090
rs1057519090
A 0.700 CausalMutation CLINVAR

dbSNP: rs28936375
rs28936375
A 0.700 CausalMutation CLINVAR

dbSNP: rs2234693
rs2234693
0.010 GeneticVariation BEFREE Conclusions Minor allele rs2234693-C was associated with renal and cutaneous involvement, as well as the absence of arthritis, anti-ANA and anti-RNP autoantibodies. 27681518

2017

dbSNP: rs1385889785
rs1385889785
0.010 GeneticVariation BEFREE We found that female sex, colonic involvement, and the AA genotype at -110 G>A were associated with increased risk of both subtypes of PA, although the association appears to be stronger for arthritis than for arthralgia. 19235910

2009

dbSNP: rs204989
rs204989
0.020 GeneticVariation BEFREE GPSM3 deficiency protects mice from inflammatory arthritis and, in humans, GPSM3 single-nucleotide polymorphisms (SNPs) are inversely associated with the risk of rheumatoid arthritis development; recently, these polymorphisms were linked to one particular SNP (rs204989) that decreases GPSM3 transcript abundance. 27307211

2016

dbSNP: rs204989
rs204989
0.020 GeneticVariation BEFREE Previous genome-wide association studies have highlighted single-nucleotide polymorphisms (SNPs; rs204989 and rs204991) in a region upstream of the GPSM3 transcription start site as being inversely correlated to the prevalence of rheumatoid arthritis (RA)-this association is supported by the protection afforded to Gpsm3-deficient mice in models of inflammatory arthritis. 26821282

2016

dbSNP: rs204991
rs204991
0.010 GeneticVariation BEFREE Previous genome-wide association studies have highlighted single-nucleotide polymorphisms (SNPs; rs204989 and rs204991) in a region upstream of the GPSM3 transcription start site as being inversely correlated to the prevalence of rheumatoid arthritis (RA)-this association is supported by the protection afforded to Gpsm3-deficient mice in models of inflammatory arthritis. 26821282

2016

dbSNP: rs1800562
rs1800562
0.080 GeneticVariation BEFREE There was no association between the presence of HFE mutations and the prevalence of self-reported, doctor-diagnosed arthritis (C282Y/wild type (WT) adjusted OR = 1.041 (95% confidence interval (CI) 0.68-1.61), H63D/WT OR = 0.76 (95% CI 0.53-1.08), C282Y/C282Y OR = 0.39 (95% CI 0.04-3.63), C282Y/H 63D OR = 0.808 (95% CI 0.27-2.42), H63D/H63D OR = 0.419 (95% CI 0.13-1.36)). 16638105

2006

dbSNP: rs1800562
rs1800562
0.080 GeneticVariation BEFREE The 124 C282Y homozygotes who filled out the written questionnaire and the 17 C282Y homozygotes who completed the physician double-blind interview reported no significantly higher rates of arthritis or joint pain, abdominal pain, arrhythmias, darkening of skin, or other symptoms traditionally associated with hemochromatosis compared with the 22,429 wild-type controls who filled out the written questionnaire and 29 wild-type controls who completed the double-blind interview. 12059121

2002

dbSNP: rs1800562
rs1800562
0.080 GeneticVariation BEFREE All previously undiagnosed C282Y homozygotes (35 male, 67 female) and all HFE wild-types (131 male, 160 female) with baseline and follow-up SF concentrations <1000 microg/L were assessed for HH-associated signs and symptoms including abnormal second/third metacarpophalangeal joints (MCP2/3), raised liver enzymes, hepatomegaly, and self-reported liver disease, fatigue, diabetes mellitus, and use of arthritis medication. 20583211

2010

dbSNP: rs1800562
rs1800562
0.080 GeneticVariation BEFREE Hereditary hemochromatosis (HH) is a genetic disease associated with iron overload, in which individuals homozygous for the mutant C282Y HFE associated allele are at risk of developing liver disease, diabetes and arthritis. 17904763

2008

dbSNP: rs1800562
rs1800562
0.080 GeneticVariation BEFREE These data suggest that most of the C282Y homozygotes occurred in this arthritis group by chance and that their arthritis was incidental to their HFE genotype. 11886966

2002

dbSNP: rs1800562
rs1800562
0.080 GeneticVariation BEFREE In Northern-European ancestry populations, HFE gene C282Y mutations are relatively common (0.3%-0.6% rare homozygote prevalence) and associated with excessive iron absorption, fatigue, diabetes, arthritis, and liver disease, especially in men. 30657865

2019