Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs5498
rs5498
0.060 GeneticVariation BEFREE Prevalence of the K469E polymorphism of intercellular adhesion molecule 1 gene in Italian patients with inflammatory bowel disease. 15334773

2004

dbSNP: rs1248696
rs1248696
0.100 GeneticVariation BEFREE We present here a study of the genetic variation described in that report in two well-powered, independent case-control cohorts and one family-based collection, and confirm the proposed association between IBD and the R30Q variant of DLG5 in two of the three studies. 15841097

2005

dbSNP: rs4986791
rs4986791
0.080 GeneticVariation BEFREE The Asp299Gly and Thr399Ile variants do not show an association with CD, UC, or IBD as a group, indicating that these polymorphisms are likely not the causal ones. 15905704

2005

dbSNP: rs2066844
rs2066844
0.790 GeneticVariation BEFREE Analysis of the three common mutations in the CARD15 gene (R702W, G908R and 1007fs) in South African colored patients with inflammatory bowel disease. 15967635

2005

dbSNP: rs2066845
rs2066845
0.100 GeneticVariation BEFREE Analysis of the three common mutations in the CARD15 gene (R702W, G908R and 1007fs) in South African colored patients with inflammatory bowel disease. 15967635

2005

dbSNP: rs2476601
rs2476601
0.050 GeneticVariation BEFREE These results indicate that the PTPN22 1858C-->T polymorphism does not appear to play a major role in IBD predisposition in our population. 16185327

2005

dbSNP: rs1217691063
rs1217691063
0.050 GeneticVariation BEFREE Hyperhomocysteinemia and methylenetetrahydrofolate reductase 677C-->T and 1298A-->C mutations in patients with inflammatory bowel disease. 16262529

2005

dbSNP: rs397507444
rs397507444
0.020 GeneticVariation BEFREE Hyperhomocysteinemia and methylenetetrahydrofolate reductase 677C-->T and 1298A-->C mutations in patients with inflammatory bowel disease. 16262529

2005

dbSNP: rs1050152
rs1050152
0.040 GeneticVariation BEFREE To determine whether the TC haplotype is also associated with IBD in a Japanese population, we genotyped L503F and -207G/C variants in Japanese subjects. 16373276

2006

dbSNP: rs1020856343
rs1020856343
0.020 GeneticVariation BEFREE To determine whether the TC haplotype is also associated with IBD in a Japanese population, we genotyped L503F and -207G/C variants in Japanese subjects. 16373276

2006

dbSNP: rs771184127
rs771184127
0.060 GeneticVariation BEFREE This is underscored by the finding of the association between CARD15 variants and Crohn's disease (CD) and D299G in Toll-like receptor (TLR) 4 and IBD. 16374251

2006

dbSNP: rs1127354
rs1127354
0.010 GeneticVariation BEFREE ITPA 94C>A and TPMT polymorphisms are associated with AZA-related leukopenia in IBD patients. 16431304

2006

dbSNP: rs1142345
rs1142345
0.010 GeneticVariation BEFREE ITPA(94C>A, IVS2+21A>C) and TPMT (238G>C, 460G>A, and 719A>G) genotypes were assessed in 262 IBD patients (159 females, 103 males; 67 patients with ulcerative colitis, 195 patients with Crohn's disease) treated with AZA and were correlated with the development of leukopenia and hepatotoxicity. 16431304

2006

dbSNP: rs1248696
rs1248696
0.100 GeneticVariation BEFREE We assess the frequency of the CARD15 SNPs and of the R30Q mutation in DLG5 and their contribution to the development of CD in a cohort of unrelated IBD patients (151 CD, 325 ulcerative colitis (UC)) and healthy controls (236) from South-east Norway (IBSEN cohort). 16493449

2006

dbSNP: rs5498
rs5498
0.060 GeneticVariation BEFREE In the second approach, we typed four nonsynonymous polymorphisms in genes C3 (R102G and L314P) and ICAM1 (G241R and K469E) in four independent cohorts totaling 2178 IBD cases. 16570073

2006

dbSNP: rs1799969
rs1799969
0.020 GeneticVariation BEFREE In the second approach, we typed four nonsynonymous polymorphisms in genes C3 (R102G and L314P) and ICAM1 (G241R and K469E) in four independent cohorts totaling 2178 IBD cases. 16570073

2006

dbSNP: rs1280165854
rs1280165854
0.010 GeneticVariation BEFREE In the second approach, we typed four nonsynonymous polymorphisms in genes C3 (R102G and L314P) and ICAM1 (G241R and K469E) in four independent cohorts totaling 2178 IBD cases. 16570073

2006

dbSNP: rs34694289
rs34694289
0.010 GeneticVariation BEFREE In the second approach, we typed four nonsynonymous polymorphisms in genes C3 (R102G and L314P) and ICAM1 (G241R and K469E) in four independent cohorts totaling 2178 IBD cases. 16570073

2006

dbSNP: rs1045642
rs1045642
0.100 GeneticVariation BEFREE A meta-analysis was carried out of our results and those from 8 previously published association studies of the C3435T variant in inflammatory bowel disease. 16633048

2006

dbSNP: rs1239681664
rs1239681664
0.020 GeneticVariation BEFREE A meta-analysis was carried out of our results and those from 8 previously published association studies of the C3435T variant in inflammatory bowel disease. 16633048

2006

dbSNP: rs1248696
rs1248696
0.100 GeneticVariation BEFREE The frequency of the R30Q variant allele was not significantly different in IBD (22.0%), CD (20.8%), and UC (27.6%) patients compared with healthy control subjects (28.0%). 16670524

2006

dbSNP: rs5498
rs5498
0.060 GeneticVariation BEFREE The aim of this study was to investigate polymorphisms in the NOD2/CARD15 (R702W, G908R, and 3020insC), NOD1/CARD4 (E266K, D372N), and ICAM-1 (G241R, K469E) genes, which are known to be associated with inflammation, in Turkish patients with inflammatory bowel disease and healthy control groups. 16741608

2006

dbSNP: rs1799969
rs1799969
0.020 GeneticVariation BEFREE The aim of this study was to investigate polymorphisms in the NOD2/CARD15 (R702W, G908R, and 3020insC), NOD1/CARD4 (E266K, D372N), and ICAM-1 (G241R, K469E) genes, which are known to be associated with inflammation, in Turkish patients with inflammatory bowel disease and healthy control groups. 16741608

2006

dbSNP: rs2075820
rs2075820
0.020 GeneticVariation BEFREE The aim of this study was to investigate polymorphisms in the NOD2/CARD15 (R702W, G908R, and 3020insC), NOD1/CARD4 (E266K, D372N), and ICAM-1 (G241R, K469E) genes, which are known to be associated with inflammation, in Turkish patients with inflammatory bowel disease and healthy control groups. 16741608

2006

dbSNP: rs1256517634
rs1256517634
0.010 GeneticVariation BEFREE The aim of this study was to investigate polymorphisms in the NOD2/CARD15 (R702W, G908R, and 3020insC), NOD1/CARD4 (E266K, D372N), and ICAM-1 (G241R, K469E) genes, which are known to be associated with inflammation, in Turkish patients with inflammatory bowel disease and healthy control groups. 16741608

2006